RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 APOC2P02655 101 aa21.34■■□□□ 1.01
COL13A1-202ENST00000357811 SERPINB3P29508 390 aa21.34■■□□□ 1.01
COL13A1-202ENST00000357811 BANPQ8N9N5 519 aa21.34■■□□□ 1.01
COL13A1-202ENST00000357811 CXCL16Q9H2A7 254 aa21.34■■□□□ 1.01
COL13A1-202ENST00000357811 LRMDAQ9H2I8 198 aa21.34■■□□□ 1.01
COL13A1-202ENST00000357811 MARCOQ9UEW3 520 aaPredicted RBP21.34■■□□□ 1.01
COL13A1-202ENST00000357811 LCTP09848 1927 aa21.33■■□□□ 1.01
COL13A1-202ENST00000357811 A0A087WZ62 844 aa21.33■■□□□ 1.01
COL13A1-202ENST00000357811 CXorf49A8MYA2 514 aaPredicted RBP21.33■■□□□ 1.01
COL13A1-202ENST00000357811 KITP10721 976 aa21.33■■□□□ 1.01
COL13A1-202ENST00000357811 KRT81Q14533 505 aa21.33■■□□□ 1.01
COL13A1-202ENST00000357811 CLNKQ7Z7G1 428 aa21.33■■□□□ 1.01
COL13A1-202ENST00000357811 TTC13Q8NBP0 860 aa21.33■■□□□ 1.01
COL13A1-202ENST00000357811 MZB1Q8WU39 189 aa21.33■■□□□ 1.01
COL13A1-202ENST00000357811 TMEM176AQ96HP8 235 aa21.33■■□□□ 1.01
COL13A1-202ENST00000357811 FDXACB1Q9BRP7 624 aaPredicted RBP21.33■■□□□ 1.01
COL13A1-202ENST00000357811 TOP3BO95985 862 aaKnown RBP21.33■■□□□ 1.01
COL13A1-202ENST00000357811 TROVE2P10155 538 aaKnown RBP eCLIP21.33■■□□□ 1.01
COL13A1-202ENST00000357811 KLHL38Q2WGJ6 581 aa21.33■■□□□ 1.01
COL13A1-202ENST00000357811 CDCA2Q69YH5 1023 aaPredicted RBP21.33■■□□□ 1.01
COL13A1-202ENST00000357811 CCDC110Q8TBZ0 833 aa21.33■■□□□ 1.01
COL13A1-202ENST00000357811 TSSK1BQ9BXA7 367 aa21.33■■□□□ 1.01
COL13A1-202ENST00000357811 MIS12Q9H081 205 aa21.33■■□□□ 1.01
COL13A1-202ENST00000357811 ARL8BQ9NVJ2 186 aa21.33■■□□□ 1.01
COL13A1-202ENST00000357811 HMGCRP04035 888 aa21.33■■□□□ 1
COL13A1-202ENST00000357811 CYP3A5P20815 502 aa21.33■■□□□ 1
COL13A1-202ENST00000357811 RBL1P28749 1068 aa21.33■■□□□ 1
COL13A1-202ENST00000357811 PTPN7P35236 360 aa21.33■■□□□ 1
COL13A1-202ENST00000357811 NDST1P52848 882 aa21.33■■□□□ 1
COL13A1-202ENST00000357811 CCDC15Q0P6D6 951 aa21.33■■□□□ 1
COL13A1-202ENST00000357811 AMHR2Q16671 573 aa21.33■■□□□ 1
COL13A1-202ENST00000357811 CA9Q16790 459 aa21.33■■□□□ 1
COL13A1-202ENST00000357811 TSHZ1Q6ZSZ6 1077 aa21.33■■□□□ 1
COL13A1-202ENST00000357811 SCUBE3Q8IX30 993 aa21.33■■□□□ 1
COL13A1-202ENST00000357811 ZNF276Q8N554 614 aa21.33■■□□□ 1
COL13A1-202ENST00000357811 CYTH2Q99418 400 aa21.33■■□□□ 1
COL13A1-202ENST00000357811 B3GNT5Q9BYG0 378 aa21.33■■□□□ 1
COL13A1-202ENST00000357811 DENND2DQ9H6A0 471 aaPredicted RBP21.33■■□□□ 1
COL13A1-202ENST00000357811 PTPRHQ9HD43 1115 aa21.33■■□□□ 1
COL13A1-202ENST00000357811 TXNRD2Q9NNW7 524 aa21.33■■□□□ 1
COL13A1-202ENST00000357811 IRF6O14896 467 aa21.32■■□□□ 1
COL13A1-202ENST00000357811 USP2O75604 605 aaPredicted RBP21.32■■□□□ 1
COL13A1-202ENST00000357811 GPD2P43304 727 aa21.32■■□□□ 1
COL13A1-202ENST00000357811 ATXN1P54253 815 aaKnown RBP21.32■■□□□ 1
COL13A1-202ENST00000357811 ZNF200P98182 395 aaPredicted RBP21.32■■□□□ 1
COL13A1-202ENST00000357811 FAM183BPQ6ZVS7 135 aa21.32■■□□□ 1
COL13A1-202ENST00000357811 MIPEPQ99797 713 aa21.32■■□□□ 1
COL13A1-202ENST00000357811 MAD1L1Q9Y6D9 718 aa21.32■■□□□ 1
COL13A1-202ENST00000357811 RGPD3A6NKT7 1758 aaPredicted RBP21.32■■□□□ 1
COL13A1-202ENST00000357811 RGPD4Q7Z3J3 1758 aa21.32■■□□□ 1
COL13A1-202ENST00000357811 CYB561D2O14569 222 aa21.32■■□□□ 1
COL13A1-202ENST00000357811 HCRTO43612 131 aa21.32■■□□□ 1
COL13A1-202ENST00000357811 TFE3P19532 575 aaPredicted RBP21.32■■□□□ 1
COL13A1-202ENST00000357811 TAF11Q15544 211 aa21.32■■□□□ 1
COL13A1-202ENST00000357811 Q3C1V9 767 aa21.32■■□□□ 1
COL13A1-202ENST00000357811 CMASQ8NFW8 434 aaPredicted RBP21.32■■□□□ 1
COL13A1-202ENST00000357811 HPDLQ96IR7 371 aa21.32■■□□□ 1
COL13A1-202ENST00000357811 ELP3Q9H9T3 547 aa21.32■■□□□ 1
COL13A1-202ENST00000357811 AKT3Q9Y243 479 aa21.32■■□□□ 1
COL13A1-202ENST00000357811 MGAMO43451 1857 aa21.32■■□□□ 1
COL13A1-202ENST00000357811 DOCK1Q14185 1865 aa21.32■■□□□ 1
COL13A1-202ENST00000357811 MYO18AQ92614 2054 aaKnown RBP21.31■■□□□ 1
COL13A1-202ENST00000357811 FAM237BA0A1B0GVD1 139 aa21.31■■□□□ 1
COL13A1-202ENST00000357811 TRIM49D1C9J1S8 452 aa21.31■■□□□ 1
COL13A1-202ENST00000357811 PRPSAP2O60256 369 aa21.31■■□□□ 1
COL13A1-202ENST00000357811 B4GALT4O60513 344 aa21.31■■□□□ 1
COL13A1-202ENST00000357811 MBTD1Q05BQ5 628 aa21.31■■□□□ 1
COL13A1-202ENST00000357811 CLMNQ96JQ2 1002 aa21.31■■□□□ 1
COL13A1-202ENST00000357811 TSPAN16Q9UKR8 245 aa21.31■■□□□ 1
COL13A1-202ENST00000357811 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.31■■□□□ 1
COL13A1-202ENST00000357811 A0A1B0GUA9 196 aa21.31■■□□□ 1
COL13A1-202ENST00000357811 PEX11AO75192 247 aa21.31■■□□□ 1
COL13A1-202ENST00000357811 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.31■■□□□ 1
COL13A1-202ENST00000357811 LHX5Q9H2C1 402 aa21.31■■□□□ 1
COL13A1-202ENST00000357811 CILPO75339 1184 aa21.3■■□□□ 1
COL13A1-202ENST00000357811 TXNP10599 105 aaKnown RBP21.3■■□□□ 1
COL13A1-202ENST00000357811 SKIV2L2P42285 1042 aaKnown RBP21.3■■□□□ 1
COL13A1-202ENST00000357811 BZW1Q7L1Q6 419 aaKnown RBP21.3■■□□□ 1
COL13A1-202ENST00000357811 APOBEC3FQ8IUX4 373 aaKnown RBP21.3■■□□□ 1
COL13A1-202ENST00000357811 MICAL1Q8TDZ2 1067 aa21.3■■□□□ 1
COL13A1-202ENST00000357811 TMEM120AQ9BXJ8 343 aa21.3■■□□□ 1
COL13A1-202ENST00000357811 TRIM55Q9BYV6 548 aa21.3■■□□□ 1
COL13A1-202ENST00000357811 FZD8Q9H461 694 aa21.3■■□□□ 1
COL13A1-202ENST00000357811 CYLDQ9NQC7 956 aa21.3■■□□□ 1
COL13A1-202ENST00000357811 MCM3APO60318 1980 aa21.3■■□□□ 1
COL13A1-202ENST00000357811 ARFIP2P53365 341 aa21.3■■□□□ 1
COL13A1-202ENST00000357811 DSTYKQ6XUX3 929 aa21.3■■□□□ 1
COL13A1-202ENST00000357811 RGS9BPQ6ZS82 235 aa21.3■■□□□ 1
COL13A1-202ENST00000357811 APBB1IPQ7Z5R6 666 aaPredicted RBP21.3■■□□□ 1
COL13A1-202ENST00000357811 IQCGQ9H095 443 aaKnown RBP21.3■■□□□ 1
COL13A1-202ENST00000357811 ASNSD1Q9NWL6 643 aa21.3■■□□□ 1
COL13A1-202ENST00000357811 POLR2AP24928 1970 aaKnown RBP21.3■■□□□ 1
COL13A1-202ENST00000357811 GPD1P21695 349 aa21.3■■□□□ 1
COL13A1-202ENST00000357811 PROZP22891 400 aa21.3■■□□□ 1
COL13A1-202ENST00000357811 GRIA1P42261 906 aa21.3■■□□□ 1
COL13A1-202ENST00000357811 SURF1Q15526 300 aa21.3■■□□□ 1
COL13A1-202ENST00000357811 CELF3Q5SZQ8 465 aaKnown RBP21.3■■□□□ 1
COL13A1-202ENST00000357811 FAM167AQ96KS9 214 aa21.3■■□□□ 1
COL13A1-202ENST00000357811 RSAD1Q9HA92 442 aa21.3■■□□□ 1
COL13A1-202ENST00000357811 SLC5A4Q9NY91 659 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms