RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 KANSL3Q9P2N6 904 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 SLC9A2Q9UBY0 812 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 HERC5Q9UII4 1024 aaKnown RBP8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 FEM1BQ9UK73 627 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 PCDHA10Q9Y5I2 948 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 COL24A1Q17RW2 1714 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 hCG_1818297A0A087WSY0 165 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 SMIM31A0A1B0GVY4 71 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 FCHO1O14526 889 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 BIRC5O15392 142 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZNF862O60290 1169 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 ENTPD3O75355 529 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 STAM2O75886 525 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 PSMG1O95456 288 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 ICAM1P05362 532 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 CHRNA5P30532 468 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 CAP2P40123 477 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 ELK3P41970 407 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 ALDH18A1P54886 795 aaKnown RBP8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 OSTNP61366 133 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 TMPRSS15P98073 1019 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 PDE1BQ01064 536 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 FAAP100Q0VG06 881 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 DCTN2Q13561 401 aaKnown RBP8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 NCOA4Q13772 614 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 RASA2Q15283 850 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 DLGAP5Q15398 846 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 CTC1Q2NKJ3 1217 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 PLEKHA7Q6IQ23 1121 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 GPAT2Q6NUI2 795 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 C16orf87Q6PH81 154 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 TRIM67Q6ZTA4 783 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 RELL1Q8IUW5 271 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 PPIL6Q8IXY8 311 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 DEPTORQ8TB45 409 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 CPT1BQ92523 772 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZNF668Q96K58 619 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 PTTG2Q9NZH5 202 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 NDUFA13Q9P0J0 144 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 NXF1Q9UBU9 619 aaKnown RBP8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 SHOC2Q9UQ13 582 aa8.58□□□□□ -1.04
CDC42SE1-201ENST00000357235 ARHGAP42A6NI28 874 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 K7ERI5 159 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 PMM2O15305 246 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 TMEM63AO94886 807 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 VNN1O95497 513 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 RPL22P35268 128 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 NEK3P51956 506 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 HIRAP54198 1017 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZNF252P-AS1Q0IIN9 211 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 PGM5Q15124 567 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 KLHL38Q2WGJ6 581 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 TDRPQ86YL5 185 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 UNC45BQ8IWX7 931 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 CEP70Q8NHQ1 597 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 FBXO27Q8NI29 283 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 SERAC1Q96JX3 654 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 ACAP3Q96P50 834 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 SHCBP1LQ9BZQ2 653 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 PCDH9Q9HC56 1237 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 SAR1AQ9NR31 198 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 DDX43Q9NXZ2 648 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 STX18Q9P2W9 335 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZNF212Q9UDV6 495 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 TJP2Q9UDY2 1190 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 FBXO40Q9UH90 709 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 CROTQ9UKG9 612 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 TMEM191CA6NGB0 347 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 KBTBD13C9JR72 458 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 I3L4J1 428 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 COPEO14579 308 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 EXTL3O43909 919 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 USP1O94782 785 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 TMEM191BP0C7N4 346 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 RFC1P35251 1148 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 CDKN2BP42772 138 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 HSD17B4P51659 736 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 JAK3P52333 1124 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 SNRPFP62306 86 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 CDK16Q00536 496 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 PTP4A2Q12974 167 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 BMPR2Q13873 1038 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 OASLQ15646 514 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 EFHC2Q5JST6 749 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 ISLR2Q6UXK2 745 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 RGS9BPQ6ZS82 235 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 MCF2L2Q86YR7 1114 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 IGDCC3Q8IVU1 814 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 KCTD6Q8NC69 237 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 PPP1R14CQ8TAE6 165 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 DQX1Q8TE96 717 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 OXNAD1Q96HP4 312 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 FBXL18Q96ME1 805 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 ST6GALNAC4Q9H4F1 302 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 SMYD3Q9H7B4 428 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 TDRKHQ9Y2W6 561 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 UBIAD1Q9Y5Z9 338 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZNF536O15090 1300 aa8.57□□□□□ -1.04
CDC42SE1-201ENST00000357235 ZNF541Q9H0D2 1346 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms