RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 MMADHCQ9H3L0 296 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 RECQLP46063 649 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 MGAT5Q09328 741 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 FAAP100Q0VG06 881 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 ITGA9Q13797 1035 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 SPDYAQ5MJ70 313 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 ZBTB49Q6ZSB9 765 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 TCF7L2Q9NQB0 619 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 TMX2Q9Y320 296 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 SPATA31A1Q5TZJ5 1347 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 ADGRA3Q8IWK6 1321 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 ANXA9O76027 345 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 SERPINE1P05121 402 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 PYGLP06737 847 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 ALADP13716 330 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 SHMT1P34896 483 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 GCLCP48506 637 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 PTPN11Q06124 597 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 TRIM16LQ309B1 348 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 SZRD1Q7Z422 152 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 STRA8Q7Z7C7 330 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 CCDC33Q8N5R6 958 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 OPTNQ96CV9 577 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 RIC8BQ9NVN3 520 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 TJP2Q9UDY2 1190 aa16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 RUVBL2Q9Y230 463 aaKnown RBP16.13■□□□□ 0.17
TRAPPC11-202ENST00000357207 PMPCBO75439 489 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 PSMG1O95456 288 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 RPA3P35244 121 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 PEX5P50542 639 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 PPP3CAQ08209 521 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 DMC1Q14565 340 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 EFL1Q7Z2Z2 1120 aaKnown RBP16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 HAS1Q92839 578 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 KIAA1683Q9H0B3 1180 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 PALMDQ9NP74 551 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 MAP3K20Q9NYL2 800 aaKnown RBP16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 ACOT9Q9Y305 439 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 DDTLA6NHG4 134 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 M0QYT0 321 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 PTPN7P35236 360 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 KIZQ2M2Z5 673 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 N4BP2L1Q5TBK1 243 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 TUBGCP3Q96CW5 907 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 CCDC126Q96EE4 140 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 VPS50Q96JG6 964 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 KCTD10Q9H3F6 313 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 SLC8A2Q9UPR5 921 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 SUPT3HB4E1H0 165 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 FAM58BPP0C7Q3 252 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 MMP13P45452 471 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 MPP3Q13368 585 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 ELMO3Q96BJ8 720 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 MAML3Q96JK9 1138 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 SCN3BQ9NY72 215 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 ZNF197O14709 1029 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 NCAM1P13591 858 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 FOXR2Q6PJQ5 311 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 KATNAL2Q8IYT4 538 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 GDPD5Q8WTR4 605 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 FAM192AQ9GZU8 254 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 LRRC19Q9H756 370 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 NRDE2Q9H7Z3 1164 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 CHST12Q9NRB3 414 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 ERAP1Q9NZ08 941 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 NCKIPSDQ9NZQ3 722 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 ATP11BQ9Y2G3 1177 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 TSC22D4Q9Y3Q8 395 aa16.12■□□□□ 0.17
TRAPPC11-202ENST00000357207 ZSCAN5DPP0CG00 497 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 GYS1P13807 737 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 SERPINB1P30740 379 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 MARCKSL1P49006 195 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 ACOT1Q86TX2 421 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 MFN1Q8IWA4 741 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 ZSWIM2Q8NEG5 633 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 C10orf88Q9H8K7 445 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 MROH2AA6NES4 1674 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 HNRNPRO43390 633 aaKnown RBP16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 SHOX2O60902 331 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 USP1O94782 785 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 TCF7P36402 384 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 SLC1A6P48664 564 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 QPCTQ16769 361 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 WDR49Q8IV35 697 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 PRMT6Q96LA8 375 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 TRAPPC9Q96Q05 1148 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 PDCD2LQ9BRP1 358 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 CATSPERBQ9H7T0 1116 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 ZC4H2Q9NQZ6 224 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 DDIT4Q9NX09 232 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 APPL1Q9UKG1 709 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 ATF5Q9Y2D1 282 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 TCHHQ07283 1943 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 NFIBO00712 420 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 ENTPD5O75356 428 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 CAP2P40123 477 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 FUT2Q10981 343 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 ECSITQ9BQ95 431 aa16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 AGO4Q9HCK5 861 aaKnown RBP16.11■□□□□ 0.17
TRAPPC11-202ENST00000357207 AP4E1Q9UPM8 1137 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms