RNA–Protein interactions for RNA: ENST00000356937.7

CDK11A-202, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-202ENST00000356937 PSMD5Q16401 504 aa18.83■□□□□ 0.61
CDK11A-202ENST00000356937 ERCC6LQ2NKX8 1250 aa18.83■□□□□ 0.61
CDK11A-202ENST00000356937 SEL1L2Q5TEA6 688 aa18.83■□□□□ 0.61
CDK11A-202ENST00000356937 RNF168Q8IYW5 571 aaPredicted RBP18.83■□□□□ 0.61
CDK11A-202ENST00000356937 RASGEF1CQ8N431 466 aa18.83■□□□□ 0.61
CDK11A-202ENST00000356937 FIBCD1Q8N539 461 aa18.83■□□□□ 0.61
CDK11A-202ENST00000356937 ACTRT1Q8TDG2 376 aa18.83■□□□□ 0.61
CDK11A-202ENST00000356937 HERVK_113Q902F9 699 aa18.83■□□□□ 0.61
CDK11A-202ENST00000356937 GOLGA1Q92805 767 aa18.83■□□□□ 0.61
CDK11A-202ENST00000356937 KLHL11Q9NVR0 708 aa18.83■□□□□ 0.61
CDK11A-202ENST00000356937 INSL6Q9Y581 213 aa18.83■□□□□ 0.61
CDK11A-202ENST00000356937 KIAA1671Q9BY89 1806 aa18.83■□□□□ 0.6
CDK11A-202ENST00000356937 FBXO21O94952 628 aa18.83■□□□□ 0.6
CDK11A-202ENST00000356937 SOD2P04179 222 aa18.83■□□□□ 0.6
CDK11A-202ENST00000356937 HTRA4P83105 476 aaPredicted RBP18.83■□□□□ 0.6
CDK11A-202ENST00000356937 DDR2Q16832 855 aa18.83■□□□□ 0.6
CDK11A-202ENST00000356937 RAB6CQ53S08 254 aa18.83■□□□□ 0.6
CDK11A-202ENST00000356937 SDHAF4Q5VUM1 108 aa18.83■□□□□ 0.6
CDK11A-202ENST00000356937 TXNRD3NBQ6F5E7 133 aa18.83■□□□□ 0.6
CDK11A-202ENST00000356937 RNF19BQ6ZMZ0 732 aa18.83■□□□□ 0.6
CDK11A-202ENST00000356937 ADAT2Q7Z6V5 191 aaKnown RBP18.83■□□□□ 0.6
CDK11A-202ENST00000356937 TTC9BQ8N6N2 239 aa18.83■□□□□ 0.6
CDK11A-202ENST00000356937 NOA1Q8NC60 698 aaKnown RBP18.83■□□□□ 0.6
CDK11A-202ENST00000356937 SPATA4Q8NEY3 305 aa18.83■□□□□ 0.6
CDK11A-202ENST00000356937 FBXO22Q8NEZ5 403 aa18.83■□□□□ 0.6
CDK11A-202ENST00000356937 SCAMP5Q8TAC9 235 aa18.83■□□□□ 0.6
CDK11A-202ENST00000356937 UBXN4Q92575 508 aa18.83■□□□□ 0.6
CDK11A-202ENST00000356937 FUBP3Q96I24 572 aaKnown RBP eCLIP18.83■□□□□ 0.6
CDK11A-202ENST00000356937 RAB6CQ9H0N0 254 aa18.83■□□□□ 0.6
CDK11A-202ENST00000356937 CNGB3Q9NQW8 809 aa18.83■□□□□ 0.6
CDK11A-202ENST00000356937 CHST7Q9NS84 486 aa18.83■□□□□ 0.6
CDK11A-202ENST00000356937 PCSK1NQ9UHG2 260 aa18.83■□□□□ 0.6
CDK11A-202ENST00000356937 ADAM12O43184 909 aa18.82■□□□□ 0.6
CDK11A-202ENST00000356937 HSF2BPO75031 334 aa18.82■□□□□ 0.6
CDK11A-202ENST00000356937 ZBED1O96006 694 aa18.82■□□□□ 0.6
CDK11A-202ENST00000356937 ATP2A2P16615 1042 aaKnown RBP18.82■□□□□ 0.6
CDK11A-202ENST00000356937 GPR15P49685 360 aa18.82■□□□□ 0.6
CDK11A-202ENST00000356937 DAOAP59103 153 aa18.82■□□□□ 0.6
CDK11A-202ENST00000356937 GPR17Q13304 367 aa18.82■□□□□ 0.6
CDK11A-202ENST00000356937 HFE2Q6ZVN8 426 aa18.82■□□□□ 0.6
CDK11A-202ENST00000356937 HERC6Q8IVU3 1022 aa18.82■□□□□ 0.6
CDK11A-202ENST00000356937 ZWILCHQ9H900 591 aa18.82■□□□□ 0.6
CDK11A-202ENST00000356937 NGRNQ9NPE2 291 aaKnown RBP18.82■□□□□ 0.6
CDK11A-202ENST00000356937 AAASQ9NRG9 546 aa18.82■□□□□ 0.6
CDK11A-202ENST00000356937 SLC27A5Q9Y2P5 690 aa18.82■□□□□ 0.6
CDK11A-202ENST00000356937 PCDHB12Q9Y5F1 795 aa18.82■□□□□ 0.6
CDK11A-202ENST00000356937 YJEFN3A6XGL0 299 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 E7ENQ6 273 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 TFE3P19532 575 aaPredicted RBP18.81■□□□□ 0.6
CDK11A-202ENST00000356937 YWHAZP63104 245 aaKnown RBP18.81■□□□□ 0.6
CDK11A-202ENST00000356937 CBX1P83916 185 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 ACAP1Q15027 740 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 LONRF2Q1L5Z9 754 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 DEFB106AQ8N104 65 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 STKLD1Q8NE28 680 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 PIK3R5Q8WYR1 880 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 ACSF2Q96CM8 615 aaPredicted RBP18.81■□□□□ 0.6
CDK11A-202ENST00000356937 RPGRIP1Q96KN7 1286 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 AP1M1Q9BXS5 423 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.81■□□□□ 0.6
CDK11A-202ENST00000356937 MTRRQ9UBK8 725 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 MTMR11A4FU01 709 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 DPYSL4O14531 572 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 SOAT2O75908 522 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 IL1R2P27930 398 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 MIPP30301 263 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 OR1D2P34982 312 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 SLC5A3P53794 718 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 HADHQ16836 314 aaKnown RBP18.81■□□□□ 0.6
CDK11A-202ENST00000356937 SMTNL2Q2TAL5 461 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 DCAF6Q58WW2 860 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 VSTM1Q6UX27 236 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 RSRC2Q7L4I2 434 aaKnown RBP18.81■□□□□ 0.6
CDK11A-202ENST00000356937 ZNF572Q7Z3I7 529 aaPredicted RBP18.81■□□□□ 0.6
CDK11A-202ENST00000356937 CCDC50Q8IVM0 306 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 FAM172AQ8WUF8 416 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 OXCT2Q9BYC2 517 aaPredicted RBP18.81■□□□□ 0.6
CDK11A-202ENST00000356937 PNPLA8Q9NP80 782 aa18.81■□□□□ 0.6
CDK11A-202ENST00000356937 RBM12Q9NTZ6 932 aaKnown RBP18.81■□□□□ 0.6
CDK11A-202ENST00000356937 TLL1O43897 1013 aa18.8■□□□□ 0.6
CDK11A-202ENST00000356937 DESP17661 470 aa18.8■□□□□ 0.6
CDK11A-202ENST00000356937 DNAJB2P25686 324 aa18.8■□□□□ 0.6
CDK11A-202ENST00000356937 GLUD2P49448 558 aa18.8■□□□□ 0.6
CDK11A-202ENST00000356937 SLC25A11Q02978 314 aaKnown RBP18.8■□□□□ 0.6
CDK11A-202ENST00000356937 SMC1AQ14683 1233 aaKnown RBP18.8■□□□□ 0.6
CDK11A-202ENST00000356937 KCNT1Q5JUK3 1230 aa18.8■□□□□ 0.6
CDK11A-202ENST00000356937 ARCQ7LC44 396 aa18.8■□□□□ 0.6
CDK11A-202ENST00000356937 DDX53Q86TM3 631 aaKnown RBP18.8■□□□□ 0.6
CDK11A-202ENST00000356937 KATNAL2Q8IYT4 538 aa18.8■□□□□ 0.6
CDK11A-202ENST00000356937 VPS52Q8N1B4 723 aa18.8■□□□□ 0.6
CDK11A-202ENST00000356937 SLC9A7Q96T83 725 aa18.8■□□□□ 0.6
CDK11A-202ENST00000356937 RAD9AQ99638 391 aa18.8■□□□□ 0.6
CDK11A-202ENST00000356937 PLVAPQ9BX97 442 aa18.8■□□□□ 0.6
CDK11A-202ENST00000356937 USP18Q9UMW8 372 aa18.8■□□□□ 0.6
CDK11A-202ENST00000356937 CEP290O15078 2479 aa18.8■□□□□ 0.6
CDK11A-202ENST00000356937 CCDC85CA6NKD9 419 aa18.8■□□□□ 0.6
CDK11A-202ENST00000356937 PI4K2BG5E9Z4 385 aa18.8■□□□□ 0.6
CDK11A-202ENST00000356937 ZRANB2O95218 330 aaKnown RBP eCLIP18.8■□□□□ 0.6
CDK11A-202ENST00000356937 PPM1AP35813 382 aa18.8■□□□□ 0.6
CDK11A-202ENST00000356937 MATKP42679 507 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms