RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 TCF4P15884 667 aa19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 CTNNA2P26232 953 aa19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 OR1D2P34982 312 aa19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 CTNNA1P35221 906 aaKnown RBP19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 PAFAH1B1P43034 410 aa19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 MAGEA11P43364 429 aa19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 GPR15P49685 360 aa19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 ZNF143P52747 638 aaPredicted RBP19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 TAS2R40P59535 323 aa19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 ROR1Q01973 937 aa19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 PIGHQ14442 188 aaPredicted RBP19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 FAM109BQ6ICB4 259 aaPredicted RBP19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 VSTM1Q6UX27 236 aa19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 BHLHA9Q7RTU4 235 aa19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 VPS52Q8N1B4 723 aa19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 UBL4BQ8N7F7 174 aa19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 KLHL23Q8NBE8 558 aa19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 AUTS2Q8WXX7 1259 aa19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 UBXN4Q92575 508 aa19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 ZNF638Q14966 1978 aaKnown RBP19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 FBXO21O94952 628 aa19.03■□□□□ 0.64
SMARCD3-202ENST00000356800 ARHGEF15O94989 841 aa19.03■□□□□ 0.64
SMARCD3-202ENST00000356800 PDGFRAP16234 1089 aa19.03■□□□□ 0.64
SMARCD3-202ENST00000356800 GPD1P21695 349 aa19.03■□□□□ 0.64
SMARCD3-202ENST00000356800 DAOAP59103 153 aa19.03■□□□□ 0.64
SMARCD3-202ENST00000356800 SHHQ15465 462 aa19.03■□□□□ 0.64
SMARCD3-202ENST00000356800 CCDC181Q5TID7 509 aa19.03■□□□□ 0.64
SMARCD3-202ENST00000356800 SCN4BQ8IWT1 228 aa19.03■□□□□ 0.64
SMARCD3-202ENST00000356800 SCAMP5Q8TAC9 235 aa19.03■□□□□ 0.64
SMARCD3-202ENST00000356800 ACTRT1Q8TDG2 376 aa19.03■□□□□ 0.64
SMARCD3-202ENST00000356800 MS4A14Q96JA4 679 aa19.03■□□□□ 0.64
SMARCD3-202ENST00000356800 CARD9Q9H257 536 aa19.03■□□□□ 0.64
SMARCD3-202ENST00000356800 CNGB3Q9NQW8 809 aa19.03■□□□□ 0.64
SMARCD3-202ENST00000356800 EHD2Q9NZN4 543 aa19.03■□□□□ 0.64
SMARCD3-202ENST00000356800 SLC27A5Q9Y2P5 690 aa19.03■□□□□ 0.64
SMARCD3-202ENST00000356800 PCDHA3Q9Y5H8 950 aa19.03■□□□□ 0.64
SMARCD3-202ENST00000356800 NR2E3Q9Y5X4 410 aa19.03■□□□□ 0.64
SMARCD3-202ENST00000356800 PLXNA3P51805 1871 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 CCDC66A2RUB6 948 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 GRXCR1A8MXD5 290 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 DPYSL4O14531 572 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 SOAT2O75908 522 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 USP17L7P0C7H9 530 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 MYOGP15173 224 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 COL4A4P53420 1690 aaPredicted RBP19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 SMARCB1Q12824 385 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 DDR2Q16832 855 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 CCDC14Q49A88 953 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 RAB6CQ53S08 254 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 EFHC1Q5JVL4 640 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 SH3PXD2AQ5TCZ1 1133 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 SDHAF4Q5VUM1 108 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 CC2D1AQ6P1N0 951 aaPredicted RBP19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 HFE2Q6ZVN8 426 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 ARCQ7LC44 396 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 SPRED2Q7Z698 418 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 RASGEF1CQ8N431 466 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 SPPL2BQ8TCT7 592 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 C8orf48Q96LL4 319 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 CFAP57Q96MR6 1250 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 CNPY3Q9BT09 278 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 RAB6CQ9H0N0 254 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 SMARCAL1Q9NZC9 954 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 USP3Q9Y6I4 520 aa19.02■□□□□ 0.64
SMARCD3-202ENST00000356800 LINC01553A4QN01 128 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 YJEFN3A6XGL0 299 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 E7ENQ6 273 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 LILRB3O75022 631 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 LRCH4O75427 683 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 ZBED1O96006 694 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 URODP06132 367 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 DNAJB2P25686 324 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 BMPR1AP36894 532 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 KRT17Q04695 432 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 ERCC6LQ2NKX8 1250 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 C15orf59Q2T9L4 293 aaPredicted RBP19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 PM20D1Q6GTS8 502 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 STKLD1Q8NE28 680 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 RNPC3Q96LT9 517 aaKnown RBP19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 ADAM33Q9BZ11 813 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 ZBP1Q9H171 429 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 TTC7AQ9ULT0 858 aaPredicted RBP19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 HSF2BPO75031 334 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 FYNP06241 537 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 HAPLN1P10915 354 aaPredicted RBP19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 TFE3P19532 575 aaPredicted RBP19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 SLC5A3P53794 718 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 DUSP4Q13115 394 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 NAA30Q147X3 362 aaPredicted RBP19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 SCML4Q8N228 414 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 SPATA4Q8NEY3 305 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 C2orf15Q8WU43 125 aaKnown RBP19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 FAM149B1Q96BN6 582 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 C11orf84Q9BUA3 381 aaPredicted RBP19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 ASNSD1Q9NWL6 643 aa19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 V9GYY5 206 aaPredicted RBP19.01■□□□□ 0.63
SMARCD3-202ENST00000356800 TRIM66O15016 1216 aa19■□□□□ 0.63
SMARCD3-202ENST00000356800 DAB1O75553 588 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms