RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 PTPN7P35236 360 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 KDSRQ06136 332 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 C9orf131Q5VYM1 1079 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 CAMKK1Q8N5S9 505 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 LRRN4CLQ8ND94 238 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 MOSPD2Q8NHP6 518 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 CCDC126Q96EE4 140 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 EPC1Q9H2F5 836 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 KRT84Q9NSB2 600 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 FAM47DPA6NHR8 397 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 GSG1L2A8MUP6 293 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 PEX1O43933 1283 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 PRR29P0C7W0 189 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 PPP2R1BP30154 601 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 PPIL6Q8IXY8 311 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 POMGNT2Q8NAT1 580 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 SLC35G2Q8TBE7 412 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 CASP10Q92851 521 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 OSBPL1AQ9BXW6 950 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 TMEM39BQ9GZU3 492 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 DEFB129Q9H1M3 183 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 C17orf75Q9HAS0 396 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 IMPAD1Q9NX62 359 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 KLHL28Q9NXS3 571 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 FBXO10Q9UK96 956 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 ADAM30Q9UKF2 790 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 PRR12Q9ULL5 1215 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 NEU2Q9Y3R4 380 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 CEP170BQ9Y4F5 1589 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-202ENST00000356435 GMNCA6NCL1 334 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 STAU1O95793 577 aaKnown RBP5.72□□□□□ -1.49
PTPRD-202ENST00000356435 ST13P50502 369 aaKnown RBP5.72□□□□□ -1.49
PTPRD-202ENST00000356435 DEFB128Q7Z7B8 93 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 CENPLQ8N0S6 344 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-202ENST00000356435 LRRC71Q8N4P6 559 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 ZNF333Q96JL9 665 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 ISCA1Q9BUE6 129 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 WDCPQ9H6R7 721 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 TLR8Q9NR97 1041 aaKnown RBP5.72□□□□□ -1.49
PTPRD-202ENST00000356435 ATP6V1HQ9UI12 483 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 A0A087WWV3 80 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 MGAT4DA6NG13 374 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 ITGB3P05106 788 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 CLTBP09497 229 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 ATN1P54259 1190 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-202ENST00000356435 CYTH1Q15438 398 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 RAD9BQ6WBX8 426 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 TMC7Q7Z402 723 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 MIB1Q86YT6 1006 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 SAMD3Q8N6K7 520 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 DPF2Q92785 391 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 ATG4CQ96DT6 458 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 CNPY3Q9BT09 278 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 ZCWPW1Q9H0M4 648 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 ALG13Q9NP73 1137 aaKnown RBP5.72□□□□□ -1.49
PTPRD-202ENST00000356435 PALMDQ9NP74 551 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 DDIT4Q9NX09 232 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 NDOR1Q9UHB4 597 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 CHMP2BQ9UQN3 213 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 PCDHB2Q9Y5E7 798 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 CNTNAP4Q9C0A0 1308 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 PRR36Q9H6K5 1346 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 PWP1Q13610 501 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 DDX39BQ13838 428 aaKnown RBP5.72□□□□□ -1.49
PTPRD-202ENST00000356435 BOLA3Q53S33 107 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 PPM1LQ5SGD2 360 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 DENND5BQ6ZUT9 1274 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 SERAC1Q96JX3 654 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 CNBD2Q96M20 576 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 KCNH7Q9NS40 1196 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 TMEM39AQ9NV64 488 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 DRG1Q9Y295 367 aaKnown RBP5.72□□□□□ -1.49
PTPRD-202ENST00000356435 SESN1Q9Y6P5 492 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 MROH2AA6NES4 1674 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 ESYT3A0FGR9 886 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 MANSC4A6NHS7 340 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-202ENST00000356435 STRNO43815 780 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 GHRP10912 638 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 CYP2A7P20853 494 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 TGM2P21980 687 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 EPHB2P29323 1055 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 GYS2P54840 703 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 PDK2Q15119 407 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 SBK1Q52WX2 424 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 IFNLR1Q8IU57 520 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-202ENST00000356435 CCNJLQ8IV13 435 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 ZNF669Q96BR6 464 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-202ENST00000356435 CIPCQ9C0C6 399 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 PADI4Q9UM07 663 aa5.72□□□□□ -1.49
PTPRD-202ENST00000356435 CYB561D2O14569 222 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 SNRPAP09012 282 aaKnown RBP5.71□□□□□ -1.49
PTPRD-202ENST00000356435 RAG1P15918 1043 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 ZNF24P17028 368 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 GRK4P32298 578 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 SOX6P35712 828 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 BCAT1P54687 386 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 ACTN3Q08043 901 aaPredicted RBP5.71□□□□□ -1.49
PTPRD-202ENST00000356435 BARGINQ6ZT62 677 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 VN1R5Q7Z5H4 357 aa5.71□□□□□ -1.49
PTPRD-202ENST00000356435 COMMD2Q86X83 199 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms