RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 HOXC13P31276 330 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 DGKEP52429 567 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 SEC13P55735 322 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 CLDN10P78369 228 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 KRT85P78386 507 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 USP39Q53GS9 565 aaKnown RBP11.31□□□□□ -0.6
CAPN3-204ENST00000356316 HECTD3Q5T447 861 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 BTBD8Q5XKL5 378 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 NAIF1Q69YI7 327 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-204ENST00000356316 SCARA5Q6ZMJ2 495 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 NUDT18Q6ZVK8 323 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 ACOT1Q86TX2 421 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 C11orf74Q86VG3 221 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 CCDC150Q8NCX0 1101 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 TSTD1Q8NFU3 115 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 TMC2Q8TDI7 906 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 TMEM174Q8WUU8 243 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 ZC3H10Q96K80 434 aaKnown RBP11.31□□□□□ -0.6
CAPN3-204ENST00000356316 PNKPQ96T60 521 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 IMPG2Q9BZV3 1241 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 SMYD3Q9H7B4 428 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 DMAP1Q9NPF5 467 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-204ENST00000356316 DMAC2Q9NW81 257 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 COMMD8Q9NX08 183 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 EBF1Q9UH73 591 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 SH3BP1Q9Y3L3 701 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 NME7Q9Y5B8 376 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 PCDHGA5Q9Y5G8 931 aa11.31□□□□□ -0.6
CAPN3-204ENST00000356316 E2F8A0AVK6 867 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-204ENST00000356316 ACTN4O43707 911 aaKnown RBP11.3□□□□□ -0.6
CAPN3-204ENST00000356316 KLRC4O43908 158 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 ALDH1A2O94788 518 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 OAS1P00973 400 aaKnown RBP11.3□□□□□ -0.6
CAPN3-204ENST00000356316 APODP05090 189 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 RPL13P26373 211 aaKnown RBP11.3□□□□□ -0.6
CAPN3-204ENST00000356316 GBP1P32455 592 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 SYKP43405 635 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 RAP1GAPP47736 663 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 CACNA2D1P54289 1103 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 DLG4P78352 724 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 MRPS21P82921 87 aaKnown RBP11.3□□□□□ -0.6
CAPN3-204ENST00000356316 ZXDBP98169 803 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 PKP1Q13835 747 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 DHCR24Q15392 516 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 CCDC6Q16204 474 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 PREPLQ4J6C6 727 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-204ENST00000356316 UNC93AQ86WB7 457 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 TTC30AQ86WT1 665 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 KIAA0895Q8NCT3 520 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 CCDC34Q96HJ3 373 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 GZF1Q9H116 711 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-204ENST00000356316 KCTD10Q9H3F6 313 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 FBXO44Q9H4M3 255 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 POLR3BQ9NW08 1133 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-204ENST00000356316 ATP6V1DQ9Y5K8 247 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 MYH10P35580 1976 aa11.3□□□□□ -0.6
CAPN3-204ENST00000356316 K7EQS6 105 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 SCAMP3O14828 347 aaKnown RBP11.29□□□□□ -0.6
CAPN3-204ENST00000356316 GDF9O60383 454 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 AP1G2O75843 785 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 EPN2O95208 641 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 OLFM2O95897 454 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 KRT13P13646 458 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 OPRD1P41143 372 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 EIF2DP41214 584 aaKnown RBP11.29□□□□□ -0.6
CAPN3-204ENST00000356316 PIK3CAP42336 1068 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 VAMP7P51809 220 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 CREB5Q02930 508 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 GAD2Q05329 585 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 GOLGA8FQ08AF8 430 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 GOLGA8DPQ0D2H9 430 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 SF3A2Q15428 464 aaKnown RBP11.29□□□□□ -0.6
CAPN3-204ENST00000356316 ZACNQ401N2 412 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 PPM1JQ5JR12 505 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 SV2AQ7L0J3 742 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 FAM35AQ86V20 835 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 CRYBG2Q8N1P7 616 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 CCDC33Q8N5R6 958 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 SCAMP5Q8TAC9 235 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 PLEKHO2Q8TD55 490 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 SLC2A14Q8TDB8 520 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 USP33Q8TEY7 942 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 EZH1Q92800 747 aaPredicted RBP11.29□□□□□ -0.6
CAPN3-204ENST00000356316 OTUB2Q96DC9 234 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 MFRPQ9BY79 579 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 SCAND2PQ9GZW5 306 aaPredicted RBP11.29□□□□□ -0.6
CAPN3-204ENST00000356316 POLMQ9NP87 494 aaPredicted RBP11.29□□□□□ -0.6
CAPN3-204ENST00000356316 ARHGEF4Q9NR80 690 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 TLR8Q9NR97 1041 aaKnown RBP11.29□□□□□ -0.6
CAPN3-204ENST00000356316 VPS45Q9NRW7 570 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 KRT82Q9NSB4 513 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 CACNA1AO00555 2505 aa11.29□□□□□ -0.6
CAPN3-204ENST00000356316 MYO16Q9Y6X6 1858 aa11.28□□□□□ -0.6
CAPN3-204ENST00000356316 MAPK13O15264 365 aa11.28□□□□□ -0.6
CAPN3-204ENST00000356316 ZBTB24O43167 697 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-204ENST00000356316 COCHO43405 550 aa11.28□□□□□ -0.6
CAPN3-204ENST00000356316 KAT7O95251 611 aa11.28□□□□□ -0.6
CAPN3-204ENST00000356316 VNN1O95497 513 aa11.28□□□□□ -0.6
CAPN3-204ENST00000356316 CYP17A1P05093 508 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms