RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 EEPD1Q7L9B9 569 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 CADM3Q8N126 398 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 ZNF280CQ8ND82 737 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 PDZD8Q8NEN9 1154 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 SPATA17Q96L03 361 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 GPBP1L1Q9HC44 474 aaPredicted RBP16.35■□□□□ 0.21
RTN3-205ENST00000356000 MINDY4BA8MYZ0 360 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 CCNT1O60563 726 aaKnown RBP16.35■□□□□ 0.21
RTN3-205ENST00000356000 RPS6KA4O75676 772 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 BMP10O95393 424 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 NR2F2P24468 414 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 PEX3P56589 373 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 OXA1LQ15070 435 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 TRAPPC3LQ5T215 181 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 RAVER1Q8IY67 606 aaKnown RBP16.35■□□□□ 0.21
RTN3-205ENST00000356000 ZNF34Q8IZ26 560 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 LINC00116Q8NCU8 138 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 JDP2Q8WYK2 163 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 ATP2A3Q93084 1043 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 ADAM33Q9BZ11 813 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 GCNT4Q9P109 453 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 SATB2Q9UPW6 733 aa16.35■□□□□ 0.21
RTN3-205ENST00000356000 GOLGA8CPA6NN73 597 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 CFAP99D6REC4 459 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 KLF11O14901 512 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 SERPINA6P08185 405 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 SNRPA1P09661 255 aaKnown RBP16.34■□□□□ 0.21
RTN3-205ENST00000356000 XRCC5P13010 732 aaKnown RBP16.34■□□□□ 0.21
RTN3-205ENST00000356000 PSMC3P17980 439 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 BGNP21810 368 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 ETV4P43268 484 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 CCDC142Q17RM4 750 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 HP1BP3Q5SSJ5 553 aaPredicted RBP16.34■□□□□ 0.21
RTN3-205ENST00000356000 GPR141Q7Z602 305 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 CHERPQ8IWX8 916 aaKnown RBP16.34■□□□□ 0.21
RTN3-205ENST00000356000 CPNE9Q8IYJ1 553 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 SNX29Q8TEQ0 813 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 ATG4AQ8WYN0 398 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 ACP6Q9NPH0 428 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 EPS15L1Q9UBC2 864 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 RNF11Q9Y3C5 154 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 ANKRD36CQ5JPF3 1778 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 DUOX1Q9NRD9 1551 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 ZNF536O15090 1300 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 TBKBP1A7MCY6 615 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 RGS13O14921 159 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 MTA2O94776 668 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 ATE1O95260 518 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 UQCRFS1P1P0C7P4 283 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 IL6STP40189 918 aaPredicted RBP16.34■□□□□ 0.21
RTN3-205ENST00000356000 PHKA1P46020 1223 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 IREB2P48200 963 aaKnown RBP16.34■□□□□ 0.21
RTN3-205ENST00000356000 CDK18Q07002 472 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 FXNQ16595 210 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 LSM12Q3MHD2 195 aaKnown RBP16.34■□□□□ 0.21
RTN3-205ENST00000356000 ZBED5Q49AG3 693 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 EFHC2Q5JST6 749 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 METTL24Q5JXM2 366 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 CCDC124Q96CT7 223 aaKnown RBP16.34■□□□□ 0.21
RTN3-205ENST00000356000 FERMT1Q9BQL6 677 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 KLHL25Q9H0H3 589 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 STRIP2Q9ULQ0 834 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 EXOC7Q9UPT5 735 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 SORCS3Q9UPU3 1222 aa16.34■□□□□ 0.21
RTN3-205ENST00000356000 GTPBP10A4D1E9 387 aaKnown RBP16.33■□□□□ 0.21
RTN3-205ENST00000356000 H3BNH8 94 aa16.33■□□□□ 0.21
RTN3-205ENST00000356000 J3QRK9 145 aa16.33■□□□□ 0.21
RTN3-205ENST00000356000 SMIM22K7EJ46 135 aa16.33■□□□□ 0.21
RTN3-205ENST00000356000 CAPNS1P04632 268 aa16.33■□□□□ 0.21
RTN3-205ENST00000356000 SCNN1DP51172 638 aa16.33■□□□□ 0.21
RTN3-205ENST00000356000 ALDH18A1P54886 795 aaKnown RBP16.33■□□□□ 0.21
RTN3-205ENST00000356000 ADGRE1Q14246 886 aa16.33■□□□□ 0.21
RTN3-205ENST00000356000 LETM2Q2VYF4 491 aa16.33■□□□□ 0.21
RTN3-205ENST00000356000 KCNK18Q7Z418 384 aa16.33■□□□□ 0.21
RTN3-205ENST00000356000 SUN5Q8TC36 379 aa16.33■□□□□ 0.21
RTN3-205ENST00000356000 FBXL8Q96CD0 374 aa16.33■□□□□ 0.21
RTN3-205ENST00000356000 MRRFQ96E11 262 aaKnown RBP16.33■□□□□ 0.21
RTN3-205ENST00000356000 IMPG2Q9BZV3 1241 aa16.33■□□□□ 0.21
RTN3-205ENST00000356000 SEL1LQ9UBV2 794 aa16.33■□□□□ 0.21
RTN3-205ENST00000356000 SCN11AQ9UI33 1791 aa16.33■□□□□ 0.2
RTN3-205ENST00000356000 FAM170AA1A519 330 aa16.33■□□□□ 0.2
RTN3-205ENST00000356000 CENPBD1B2RD01 187 aa16.33■□□□□ 0.2
RTN3-205ENST00000356000 TMX2-CTNND1H3BSU7 103 aa16.33■□□□□ 0.2
RTN3-205ENST00000356000 PRKACBP22694 351 aa16.33■□□□□ 0.2
RTN3-205ENST00000356000 PDIA2Q13087 525 aaKnown RBP16.33■□□□□ 0.2
RTN3-205ENST00000356000 FRA10AC1Q70Z53 315 aa16.33■□□□□ 0.2
RTN3-205ENST00000356000 MZB1Q8WU39 189 aa16.33■□□□□ 0.2
RTN3-205ENST00000356000 MROQ9BYG7 248 aa16.33■□□□□ 0.2
RTN3-205ENST00000356000 CNGB3Q9NQW8 809 aa16.33■□□□□ 0.2
RTN3-205ENST00000356000 CNTN3Q9P232 1028 aa16.33■□□□□ 0.2
RTN3-205ENST00000356000 PPME1Q9Y570 386 aa16.33■□□□□ 0.2
RTN3-205ENST00000356000 PCDHGA3Q9Y5H0 932 aa16.33■□□□□ 0.2
RTN3-205ENST00000356000 CORINQ9Y5Q5 1042 aa16.33■□□□□ 0.2
RTN3-205ENST00000356000 DOCK2Q92608 1830 aa16.33■□□□□ 0.2
RTN3-205ENST00000356000 ASTN2O75129 1339 aaPredicted RBP16.33■□□□□ 0.2
RTN3-205ENST00000356000 MTRF1O75570 445 aaKnown RBP16.32■□□□□ 0.2
RTN3-205ENST00000356000 GABRB3P28472 473 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 AP3M2P53677 418 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 GPC5P78333 572 aa16.32■□□□□ 0.2
RTN3-205ENST00000356000 ADAM17P78536 824 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms