RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 HOXA2O43364 376 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 F9P00740 461 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 RHOAP61586 193 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 RPL10AP62906 217 aaKnown RBP13.66□□□□□ -0.22
SCN8A-202ENST00000355133 DYNC1I2Q13409 638 aaKnown RBP13.66□□□□□ -0.22
SCN8A-202ENST00000355133 CACHD1Q5VU97 1274 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 ADGRA1Q86SQ6 560 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 TNIP2Q8NFZ5 429 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 SLC20A1Q8WUM9 679 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 TMEM176AQ96HP8 235 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 FRMD8Q9BZ67 464 aaPredicted RBP13.66□□□□□ -0.22
SCN8A-202ENST00000355133 CPS1P31327 1500 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 CBX4O00257 560 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 POMCP01189 267 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 SERPINB5P36952 375 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 MOXD1Q6UVY6 613 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 OTOAQ7RTW8 1153 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 PCSK9Q8NBP7 692 aaKnown RBP13.66□□□□□ -0.22
SCN8A-202ENST00000355133 ARRDC4Q8NCT1 418 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 CISHQ9NSE2 258 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 USP18Q9UMW8 372 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 CNTNAP2Q9UHC6 1331 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 TPST1O60507 370 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 DAB1O75553 588 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 KRT8P05787 483 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 RRM1P23921 792 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 GMCL1Q96IK5 515 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 PAWRQ96IZ0 340 aaKnown RBP13.66□□□□□ -0.22
SCN8A-202ENST00000355133 CIPCQ9C0C6 399 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 NT5MQ9NPB1 228 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 UBP1Q9NZI7 540 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 BLOC1S6Q9UL45 172 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 PCYT1AP49585 367 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 EPHB3P54753 998 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 CAMK2GQ13555 558 aaPredicted RBP13.66□□□□□ -0.22
SCN8A-202ENST00000355133 CHMP1BQ7LBR1 199 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 ELOA2Q8IYF1 753 aaPredicted RBP13.66□□□□□ -0.22
SCN8A-202ENST00000355133 SYTL5Q8TDW5 730 aaPredicted RBP13.66□□□□□ -0.22
SCN8A-202ENST00000355133 ATP8B4Q8TF62 1192 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 SERPINB12Q96P63 405 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 ZC4H2Q9NQZ6 224 aa13.66□□□□□ -0.22
SCN8A-202ENST00000355133 XPO1O14980 1071 aaKnown RBP13.65□□□□□ -0.22
SCN8A-202ENST00000355133 MYL4P12829 197 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 SERPINB8P50452 374 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 ALDH6A1Q02252 535 aaKnown RBP13.65□□□□□ -0.22
SCN8A-202ENST00000355133 SETD3Q86TU7 594 aaPredicted RBP13.65□□□□□ -0.22
SCN8A-202ENST00000355133 WDR49Q8IV35 697 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 ELMO3Q96BJ8 720 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 TMEM121Q9BTD3 319 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 UNC13BO14795 1591 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 LRRIQ3A6PVS8 624 aaPredicted RBP13.65□□□□□ -0.22
SCN8A-202ENST00000355133 JCHAINP01591 159 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 S100A5P33763 92 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 LHX1P48742 406 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 TOB1P50616 345 aaPredicted RBP13.65□□□□□ -0.22
SCN8A-202ENST00000355133 TKTL1P51854 596 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 ZNF720Q7Z2F6 126 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 AKT1S1Q96B36 256 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 DSEQ9UL01 958 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 PLAGL2Q9UPG8 496 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 RNASEH1O60930 286 aaKnown RBP13.65□□□□□ -0.22
SCN8A-202ENST00000355133 GLRA3O75311 464 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 APOA4P06727 396 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 CHI3L1P36222 383 aaPredicted RBP13.65□□□□□ -0.22
SCN8A-202ENST00000355133 CXCL9Q07325 125 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 C11orf63Q6NUN7 778 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 LRRC6Q86X45 466 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 P3H2Q8IVL5 708 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 MYO1HQ8N1T3 1032 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 DPF3Q92784 378 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 IGF2BP3O00425 579 aaKnown RBP eCLIP13.65□□□□□ -0.22
SCN8A-202ENST00000355133 HNRNPRO43390 633 aaKnown RBP13.65□□□□□ -0.22
SCN8A-202ENST00000355133 TARSP26639 723 aaKnown RBP13.65□□□□□ -0.22
SCN8A-202ENST00000355133 COPAP53621 1224 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 ZNF284Q2VY69 593 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 PGS1Q32NB8 556 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 ZNF280DQ6N043 979 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 IYDQ6PHW0 289 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 DNAAF5Q86Y56 855 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 RXFP2Q8WXD0 754 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 ZNF333Q96JL9 665 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 USE1Q9NZ43 259 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 DCDC2Q9UHG0 476 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 ZNF711Q9Y462 761 aa13.65□□□□□ -0.22
SCN8A-202ENST00000355133 POLR1AO95602 1720 aaPredicted RBP13.65□□□□□ -0.22
SCN8A-202ENST00000355133 GSNP06396 782 aa13.65□□□□□ -0.23
SCN8A-202ENST00000355133 TFE3P19532 575 aaPredicted RBP13.65□□□□□ -0.23
SCN8A-202ENST00000355133 KCNA3P22001 575 aa13.65□□□□□ -0.23
SCN8A-202ENST00000355133 MRPL28Q13084 256 aaKnown RBP13.65□□□□□ -0.23
SCN8A-202ENST00000355133 SLC30A10Q6XR72 485 aa13.65□□□□□ -0.23
SCN8A-202ENST00000355133 SPOCD1Q6ZMY3 1216 aa13.65□□□□□ -0.23
SCN8A-202ENST00000355133 DNAJB3Q8WWF6 145 aa13.65□□□□□ -0.23
SCN8A-202ENST00000355133 CLPBQ9H078 707 aa13.65□□□□□ -0.23
SCN8A-202ENST00000355133 COPS7BQ9H9Q2 264 aaPredicted RBP13.65□□□□□ -0.23
SCN8A-202ENST00000355133 SCN3BQ9NY72 215 aa13.65□□□□□ -0.23
SCN8A-202ENST00000355133 FAM205AQ6ZU69 1335 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 CCT8L1PA6NM43 557 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 PDHXO00330 501 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 AKAP5P24588 427 aa13.64□□□□□ -0.23
SCN8A-202ENST00000355133 GPC1P35052 558 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms