RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 TMEM270Q6UE05 265 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 C8orf59Q8N0T1 100 aaPredicted RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 CCDC185Q8N715 623 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 SUN5Q8TC36 379 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 GTF3C2Q8WUA4 911 aaPredicted RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 TMA16Q96EY4 203 aaKnown RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 AP1M1Q9BXS5 423 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 MRPL4Q9BYD3 311 aaKnown RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 POLA2Q14181 598 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 ATPAF2Q8N5M1 289 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 NUAK2Q9H093 628 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 DDX20Q9UHI6 824 aaKnown RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 CPDO75976 1380 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 CDH4P55283 916 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 SMIM11AP58511 58 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 TIGD7Q6NT04 549 aaPredicted RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 IYDQ6PHW0 289 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 OXNAD1Q96HP4 312 aaPredicted RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 RACGAP1Q9H0H5 632 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 HPS4Q9NQG7 708 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 SEPT9Q9UHD8 586 aaPredicted RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 DRG1Q9Y295 367 aaKnown RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 LMTK3Q96Q04 1460 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 ZSCAN9O15535 394 aaPredicted RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 NPTXRO95502 500 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 STX4Q12846 297 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 LRRC17Q8N6Y2 441 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 SLC35G2Q8TBE7 412 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 SPRTNQ9H040 489 aaPredicted RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 PRPF19Q9UMS4 504 aaKnown RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 HSD17B3P37058 310 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 POLD2P49005 469 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 STOX1Q6ZVD7 989 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 AGR3Q8TD06 166 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 TRMOQ9BU70 441 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 PIH1D3Q9NQM4 214 aaKnown RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 CNOT8Q9UFF9 292 aaKnown RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 CAND2O75155 1236 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 CDH18Q13634 790 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 SLC29A2Q14542 456 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 DUOXA2Q1HG44 320 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 C3orf62Q6ZUJ4 267 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 MAPKAPK5Q8IW41 473 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 FAM193BQ96PV7 902 aaPredicted RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 MND1Q9BWT6 205 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 PHTF1Q9UMS5 762 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 KCTD21Q4G0X4 260 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 LHFPL3Q86UP9 236 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 SLC44A2Q8IWA5 706 aaPredicted RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 PROCA1Q8NCQ7 364 aaPredicted RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 DBNDD2Q9BQY9 259 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 PRKD2Q9BZL6 878 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 RPS6KA6Q9UK32 745 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 ATP9AO75110 1047 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 CD2BP2O95400 341 aaKnown RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 TMEM253P0C7T8 217 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 COASYQ13057 564 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 OASLQ15646 514 aaKnown RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 CATSPERBQ9H7T0 1116 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 TULP4Q9NRJ4 1543 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 DUOX1Q9NRD9 1551 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 TULP3O75386 442 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 KRT77Q7Z794 578 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 MIER2Q8N344 545 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 APOPT1Q96IL0 206 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 GPR101Q96P66 508 aaPredicted RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 RP1P56715 2156 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 IDO1P14902 403 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 ARHGDIBP52566 201 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 PRKAA1Q13131 559 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 PEX5LQ8IYB4 626 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 C7orf25Q9BPX7 421 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 CRB1P82279 1406 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 ALADP13716 330 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 NUDT2P50583 147 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 DRG2P55039 364 aaKnown RBP8.28□□□□□ -1.08
HTT-201ENST00000355072 CLEC4GQ6UXB4 293 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 PROX1Q92786 737 aa8.28□□□□□ -1.08
HTT-201ENST00000355072 PIPSLA2A3N6 862 aa8.27□□□□□ -1.08
HTT-201ENST00000355072 RPN2P04844 631 aa8.27□□□□□ -1.08
HTT-201ENST00000355072 FGFR4P22455 802 aa8.27□□□□□ -1.08
HTT-201ENST00000355072 DCKP27707 260 aa8.27□□□□□ -1.08
HTT-201ENST00000355072 PKN3Q6P5Z2 889 aa8.27□□□□□ -1.08
HTT-201ENST00000355072 TMEM216Q9P0N5 145 aa8.27□□□□□ -1.08
HTT-201ENST00000355072 UBA6A0AVT1 1052 aaPredicted RBP8.27□□□□□ -1.08
HTT-201ENST00000355072 BBIP1A8MTZ0 92 aa8.27□□□□□ -1.08
HTT-201ENST00000355072 PHF20L1A8MW92 1017 aa8.27□□□□□ -1.08
HTT-201ENST00000355072 MFN2O95140 757 aa8.27□□□□□ -1.08
HTT-201ENST00000355072 RTN3O95197 1032 aaPredicted RBP8.27□□□□□ -1.08
HTT-201ENST00000355072 UBTFL6P0CB48 400 aaPredicted RBP8.27□□□□□ -1.08
HTT-201ENST00000355072 ALDH18A1P54886 795 aaKnown RBP8.27□□□□□ -1.08
HTT-201ENST00000355072 DPYDQ12882 1025 aa8.27□□□□□ -1.08
HTT-201ENST00000355072 RAPGEF5Q92565 580 aa8.27□□□□□ -1.08
HTT-201ENST00000355072 DDX47Q9H0S4 455 aaKnown RBP8.27□□□□□ -1.08
HTT-201ENST00000355072 PNMA3Q9UL41 463 aa8.27□□□□□ -1.08
HTT-201ENST00000355072 C2orf81A6NN90 581 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 ZW10O43264 779 aa8.27□□□□□ -1.09
HTT-201ENST00000355072 SERPINE1P05121 402 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms