RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 IGDCC3Q8IVU1 814 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 KBTBD2Q8IY47 623 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 ARFGAP1Q8N6T3 406 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 OR5B17Q8NGF7 314 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 PIP4K2CQ8TBX8 421 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 FAM84AQ96KN4 292 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 FAM96AQ9H5X1 160 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 DHX33Q9H6R0 707 aaKnown RBP11.89□□□□□ -0.51
CAPN9-202ENST00000354537 RAVER2Q9HCJ3 691 aaKnown RBP11.89□□□□□ -0.51
CAPN9-202ENST00000354537 METTL5Q9NRN9 209 aaKnown RBP11.89□□□□□ -0.51
CAPN9-202ENST00000354537 PAK5Q9P286 719 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 SEPT9Q9UHD8 586 aaPredicted RBP11.89□□□□□ -0.51
CAPN9-202ENST00000354537 H3BRJ5 948 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 RBP3P10745 1247 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 RFC1P35251 1148 aaPredicted RBP11.89□□□□□ -0.51
CAPN9-202ENST00000354537 CLCN2P51788 898 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 YWHAGP61981 247 aaKnown RBP eCLIP11.89□□□□□ -0.51
CAPN9-202ENST00000354537 BST1Q10588 318 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 TFDP2Q14188 446 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 NOMO1Q15155 1222 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 HSF5Q4G112 596 aaPredicted RBP11.89□□□□□ -0.51
CAPN9-202ENST00000354537 TEX44Q53QW1 395 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 SAMD1Q6SPF0 538 aaPredicted RBP11.89□□□□□ -0.51
CAPN9-202ENST00000354537 ZPBP2Q6X784 338 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 TTC7BQ86TV6 843 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 TREML1Q86YW5 311 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 EGFL6Q8IUX8 553 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 SLC4A11Q8NBS3 891 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 PHC3Q8NDX5 983 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 DEPTORQ8TB45 409 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 RTP4Q96DX8 246 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 GJD4Q96KN9 370 aaPredicted RBP11.89□□□□□ -0.51
CAPN9-202ENST00000354537 PANX3Q96QZ0 392 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 GORASP1Q9BQQ3 440 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 CENPKQ9BS16 269 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 PPP1R12CQ9BZL4 782 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 CISHQ9NSE2 258 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 PPARGC1AQ9UBK2 798 aaKnown RBP11.89□□□□□ -0.51
CAPN9-202ENST00000354537 WASF2Q9Y6W5 498 aa11.89□□□□□ -0.51
CAPN9-202ENST00000354537 TRIM49D1C9J1S8 452 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 KRT38O76015 456 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 NR3C2P08235 984 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 BRD2P25440 801 aaKnown RBP11.88□□□□□ -0.51
CAPN9-202ENST00000354537 IL1R2P27930 398 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 SSTR3P32745 418 aaPredicted RBP11.88□□□□□ -0.51
CAPN9-202ENST00000354537 CRHR1P34998 444 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 SERPINB9P50453 376 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 CDK7P50613 346 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 DYNLT1P63172 113 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 BASP1P80723 227 aaKnown RBP11.88□□□□□ -0.51
CAPN9-202ENST00000354537 TMPRSS15P98073 1019 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 ROR1Q01973 937 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 TIFABQ6ZNK6 161 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 ACAD11Q709F0 780 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 ALYREFQ86V81 257 aaKnown RBP11.88□□□□□ -0.51
CAPN9-202ENST00000354537 RFX6Q8HWS3 928 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 FAM71DQ8N9W8 422 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 KCTD6Q8NC69 237 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 STKLD1Q8NE28 680 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 ACSF2Q96CM8 615 aaPredicted RBP11.88□□□□□ -0.51
CAPN9-202ENST00000354537 GLIS2Q9BZE0 524 aaPredicted RBP11.88□□□□□ -0.51
CAPN9-202ENST00000354537 ZWILCHQ9H900 591 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 JPH1Q9HDC5 661 aaPredicted RBP11.88□□□□□ -0.51
CAPN9-202ENST00000354537 NDUFA13Q9P0J0 144 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 SLC7A8Q9UHI5 535 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 TTLL3Q9Y4R7 772 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 AP1G2O75843 785 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 KLHL2O95198 593 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 ENO1P06733 434 aaKnown RBP11.88□□□□□ -0.51
CAPN9-202ENST00000354537 CNTFP26441 200 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 POLE2P56282 527 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 RSBN1LQ6PCB5 846 aaPredicted RBP11.88□□□□□ -0.51
CAPN9-202ENST00000354537 IZUMO2Q6UXV1 221 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 CYS1Q717R9 158 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 TRMT1LQ7Z2T5 733 aaKnown RBP11.88□□□□□ -0.51
CAPN9-202ENST00000354537 SDCCAG8Q86SQ7 713 aaPredicted RBP11.88□□□□□ -0.51
CAPN9-202ENST00000354537 NUDCD3Q8IVD9 361 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 CPXCR1Q8N123 301 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 MTMR14Q8NCE2 650 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 MCUQ8NE86 351 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 JADE3Q92613 823 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 ZNF341Q9BYN7 854 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 ARMCX1Q9P291 453 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 SAE1Q9UBE0 346 aaPredicted RBP11.88□□□□□ -0.51
CAPN9-202ENST00000354537 PGAP2Q9UHJ9 254 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 SOX13Q9UN79 622 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.88□□□□□ -0.51
CAPN9-202ENST00000354537 COMMD3-BMI1R4GMX3 469 aa11.88□□□□□ -0.51
CAPN9-202ENST00000354537 SDR42E2A6NKP2 422 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 E5RJQ4 531 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 BUD23O43709 281 aaKnown RBP11.87□□□□□ -0.51
CAPN9-202ENST00000354537 RFPL1O75677 317 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 RNF8O76064 485 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 TRUB2O95900 331 aaKnown RBP11.87□□□□□ -0.51
CAPN9-202ENST00000354537 BPGMP07738 259 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 MYL4P12829 197 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 IRX4P78413 519 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 PRPF39Q86UA1 669 aaKnown RBP11.87□□□□□ -0.51
CAPN9-202ENST00000354537 ST13P4Q8IZP2 240 aaPredicted RBP11.87□□□□□ -0.51
CAPN9-202ENST00000354537 SPATA18Q8TC71 538 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms