RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 CRLS1Q9UJA2 301 aa15.45■□□□□ 0.06
COL17A1-201ENST00000353479 FAM237AA0A1B0GTK4 181 aa15.45■□□□□ 0.06
COL17A1-201ENST00000353479 CFAP99D6REC4 459 aa15.45■□□□□ 0.06
COL17A1-201ENST00000353479 ANKRD65E5RJM6 399 aa15.45■□□□□ 0.06
COL17A1-201ENST00000353479 BDNFP23560 247 aa15.45■□□□□ 0.06
COL17A1-201ENST00000353479 HMOX2P30519 316 aa15.45■□□□□ 0.06
COL17A1-201ENST00000353479 YWHAZP63104 245 aaKnown RBP15.45■□□□□ 0.06
COL17A1-201ENST00000353479 ZNF268Q14587 947 aaPredicted RBP15.45■□□□□ 0.06
COL17A1-201ENST00000353479 MROH9Q5TGP6 573 aa15.45■□□□□ 0.06
COL17A1-201ENST00000353479 MEI1Q5TIA1 1274 aa15.45■□□□□ 0.06
COL17A1-201ENST00000353479 ADAM32Q8TC27 787 aa15.45■□□□□ 0.06
COL17A1-201ENST00000353479 KAT5Q92993 513 aa15.45■□□□□ 0.06
COL17A1-201ENST00000353479 CDT1Q9H211 546 aa15.45■□□□□ 0.06
COL17A1-201ENST00000353479 SLC39A10Q9ULF5 831 aa15.45■□□□□ 0.06
COL17A1-201ENST00000353479 PRR23AA6NEV1 266 aa15.45■□□□□ 0.06
COL17A1-201ENST00000353479 ELNP15502 786 aa15.45■□□□□ 0.06
COL17A1-201ENST00000353479 CYP2F1P24903 491 aa15.45■□□□□ 0.06
COL17A1-201ENST00000353479 CCR1P32246 355 aa15.45■□□□□ 0.06
COL17A1-201ENST00000353479 MCL1Q07820 350 aa15.45■□□□□ 0.06
COL17A1-201ENST00000353479 TERF2Q15554 542 aa15.45■□□□□ 0.06
COL17A1-201ENST00000353479 NFIL3Q16649 462 aa15.45■□□□□ 0.06
COL17A1-201ENST00000353479 PYGLP06737 847 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 TGM2P21980 687 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 ZNF280AP59817 542 aaPredicted RBP15.44■□□□□ 0.06
COL17A1-201ENST00000353479 PTK6Q13882 451 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 TBCCQ15814 346 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 ERMARDQ5T6L9 678 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 TTC39BQ5VTQ0 682 aaPredicted RBP15.44■□□□□ 0.06
COL17A1-201ENST00000353479 AMIGO3Q86WK7 504 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 HERC6Q8IVU3 1022 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 VIPAS39Q9H9C1 493 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 SMPD4Q9NXE4 827 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 USH1CQ9Y6N9 552 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 NFKBIEO00221 500 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 DDX3XO00571 662 aaKnown RBP eCLIP15.44■□□□□ 0.06
COL17A1-201ENST00000353479 ADCK2Q7Z695 626 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 SLC51AQ86UW1 340 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 MTMR8Q96EF0 704 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 ZIM3Q96PE6 472 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 ELOVL4Q9GZR5 314 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 CD274Q9NZQ7 290 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 SLC25A13Q9UJS0 675 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 VAV3Q9UKW4 847 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 AAR2Q9Y312 384 aaKnown RBP15.44■□□□□ 0.06
COL17A1-201ENST00000353479 RPS6KL1Q9Y6S9 549 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 SUPT3HB4E1H0 165 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 CBX4O00257 560 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 B4GALT5O43286 388 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 SUPT3HO75486 399 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 JCHAINP01591 159 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 HSDL1Q3SXM5 330 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 LPPQ93052 612 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 FRMD8Q9BZ67 464 aaPredicted RBP15.44■□□□□ 0.06
COL17A1-201ENST00000353479 SCUBE2Q9NQ36 999 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 SERPIND1P05546 499 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 YWHAQP27348 245 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 TBX4P57082 545 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 C11orf63Q6NUN7 778 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 INPP4AQ96PE3 977 aaPredicted RBP15.44■□□□□ 0.06
COL17A1-201ENST00000353479 APOL2Q9BQE5 337 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 SLIT2O94813 1529 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 RHOBTB1O94844 696 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 CALCAP01258 141 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 CSE1LP55060 971 aaKnown RBP15.44■□□□□ 0.06
COL17A1-201ENST00000353479 CELF6Q96J87 481 aaKnown RBP15.44■□□□□ 0.06
COL17A1-201ENST00000353479 PPCSQ9HAB8 311 aa15.44■□□□□ 0.06
COL17A1-201ENST00000353479 GJB6O95452 261 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 MYL2P10916 166 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 CKBP12277 381 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 KPNA1P52294 538 aaPredicted RBP15.43■□□□□ 0.06
COL17A1-201ENST00000353479 STX3Q13277 289 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 WSCD1Q658N2 575 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 PPTC7Q8NI37 304 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 IL17RAQ96F46 866 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 APOL5Q9BWW9 433 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 ADA2Q9NZK5 511 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 ZNF212Q9UDV6 495 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 DOLKQ9UPQ8 538 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 FAM47DPA6NHR8 397 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 CD52P31358 61 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 RGS4P49798 205 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 NBPF20Q3BBV1 942 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 SPRYD7Q5W111 196 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 PAPD7Q5XG87 772 aaKnown RBP15.43■□□□□ 0.06
COL17A1-201ENST00000353479 ZDHHC17Q8IUH5 632 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 DEFB106AQ8N104 65 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 ACTRT1Q8TDG2 376 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 UCMAQ8WVF2 138 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 TNFRSF25Q93038 417 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 CENPKQ9BS16 269 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 TSPYL2Q9H2G4 693 aaPredicted RBP15.43■□□□□ 0.06
COL17A1-201ENST00000353479 MARCOQ9UEW3 520 aaPredicted RBP15.43■□□□□ 0.06
COL17A1-201ENST00000353479 C2orf81A6NN90 581 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 DUSP28Q4G0W2 176 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 BTBD7Q9P203 1132 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 DPP7Q9UHL4 492 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 ANGPTL2Q9UKU9 493 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 PRLRP16471 622 aa15.43■□□□□ 0.06
COL17A1-201ENST00000353479 MDH1P40925 334 aaKnown RBP15.43■□□□□ 0.06
COL17A1-201ENST00000353479 TFAP2DQ7Z6R9 452 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms