RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 YWHAZP63104 245 aaKnown RBP25.55■■□□□ 1.68
CPNE1-202ENST00000352393 PTPN11Q06124 597 aaPredicted RBP25.55■■□□□ 1.68
CPNE1-202ENST00000352393 MXD4Q14582 209 aaPredicted RBP25.55■■□□□ 1.68
CPNE1-202ENST00000352393 ACSBG2Q5FVE4 666 aa25.55■■□□□ 1.68
CPNE1-202ENST00000352393 APBB1IPQ7Z5R6 666 aaPredicted RBP25.55■■□□□ 1.68
CPNE1-202ENST00000352393 ZC3H18Q86VM9 953 aaKnown RBP25.55■■□□□ 1.68
CPNE1-202ENST00000352393 CEP120Q8N960 986 aa25.55■■□□□ 1.68
CPNE1-202ENST00000352393 CHST13Q8NET6 341 aa25.55■■□□□ 1.68
CPNE1-202ENST00000352393 OXNAD1Q96HP4 312 aaPredicted RBP25.55■■□□□ 1.68
CPNE1-202ENST00000352393 ZNF333Q96JL9 665 aa25.55■■□□□ 1.68
CPNE1-202ENST00000352393 ASNSD1Q9NWL6 643 aa25.55■■□□□ 1.68
CPNE1-202ENST00000352393 NMRK1Q9NWW6 199 aa25.55■■□□□ 1.68
CPNE1-202ENST00000352393 E5RJQ4 531 aa25.55■■□□□ 1.68
CPNE1-202ENST00000352393 LINGO3P0C6S8 592 aa25.55■■□□□ 1.68
CPNE1-202ENST00000352393 MYL2P10916 166 aa25.55■■□□□ 1.68
CPNE1-202ENST00000352393 TTC39BQ5VTQ0 682 aaPredicted RBP25.55■■□□□ 1.68
CPNE1-202ENST00000352393 CDHR3Q6ZTQ4 885 aa25.55■■□□□ 1.68
CPNE1-202ENST00000352393 SAMD7Q7Z3H4 446 aa25.55■■□□□ 1.68
CPNE1-202ENST00000352393 TTC7BQ86TV6 843 aa25.55■■□□□ 1.68
CPNE1-202ENST00000352393 FAM167AQ96KS9 214 aa25.55■■□□□ 1.68
CPNE1-202ENST00000352393 SRPK1Q96SB4 655 aaKnown RBP25.55■■□□□ 1.68
CPNE1-202ENST00000352393 ELOVL4Q9GZR5 314 aa25.55■■□□□ 1.68
CPNE1-202ENST00000352393 C2orf40Q9H1Z8 148 aa25.55■■□□□ 1.68
CPNE1-202ENST00000352393 SMYD3Q9H7B4 428 aa25.55■■□□□ 1.68
CPNE1-202ENST00000352393 ARHGEF4Q9NR80 690 aa25.55■■□□□ 1.68
CPNE1-202ENST00000352393 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.55■■□□□ 1.68
CPNE1-202ENST00000352393 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.55■■□□□ 1.682e-6■■■■■ 55.4
CPNE1-202ENST00000352393 FCHO1O14526 889 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 AVILO75366 819 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 RPS12P25398 132 aaKnown RBP25.54■■□□□ 1.68
CPNE1-202ENST00000352393 VHLP40337 213 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 ZNF143P52747 638 aaPredicted RBP25.54■■□□□ 1.68
CPNE1-202ENST00000352393 CDH6P55285 790 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 GRIK3Q13003 919 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 KPNB1Q14974 876 aaKnown RBP25.54■■□□□ 1.68
CPNE1-202ENST00000352393 RCN1Q15293 331 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 FAM47CQ5HY64 1035 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 CCDC62Q6P9F0 684 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 FAF2Q96CS3 445 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 TAS2R1Q9NYW7 299 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 ZNF180Q9UJW8 692 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 FZD1Q9UP38 647 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 C2orf71A6NGG8 1288 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 TRIM49D1C9J1S8 452 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 COPEO14579 308 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 NVLO15381 856 aaKnown RBP25.54■■□□□ 1.68
CPNE1-202ENST00000352393 GAS2O43903 313 aaKnown RBP25.54■■□□□ 1.68
CPNE1-202ENST00000352393 KRT19P08727 400 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 RARBP10826 455 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 NEFHP12036 1026 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 OSTNP61366 133 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 MRPS35P82673 323 aaKnown RBP25.54■■□□□ 1.68
CPNE1-202ENST00000352393 TFDP2Q14188 446 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 FAM102AQ5T9C2 384 aaPredicted RBP25.54■■□□□ 1.68
CPNE1-202ENST00000352393 ATF7IP2Q5U623 682 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 LRRC71Q8N4P6 559 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 RTP4Q96DX8 246 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 CFAP36Q96G28 342 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 ADPGKQ9BRR6 497 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 USP29Q9HBJ7 922 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 POPDC2Q9HBU9 364 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 HOXC10Q9NYD6 342 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 PAK5Q9P286 719 aa25.54■■□□□ 1.68
CPNE1-202ENST00000352393 IGKV6-21A0A0C4DH24 114 aa25.53■■□□□ 1.68
CPNE1-202ENST00000352393 ZBTB42B2RXF5 422 aa25.53■■□□□ 1.68
CPNE1-202ENST00000352393 CILPO75339 1184 aa25.53■■□□□ 1.68
CPNE1-202ENST00000352393 KRT36O76013 467 aa25.53■■□□□ 1.68
CPNE1-202ENST00000352393 EDNRBP24530 442 aa25.53■■□□□ 1.68
CPNE1-202ENST00000352393 CCNFP41002 786 aa25.53■■□□□ 1.68
CPNE1-202ENST00000352393 MUM1Q2TAK8 710 aa25.53■■□□□ 1.68
CPNE1-202ENST00000352393 SYCP2LQ5T4T6 812 aa25.53■■□□□ 1.68
CPNE1-202ENST00000352393 ANGEL2Q5VTE6 544 aaKnown RBP25.53■■□□□ 1.68
CPNE1-202ENST00000352393 EEF1DP3Q658K8 133 aa25.53■■□□□ 1.68
CPNE1-202ENST00000352393 TRNP1Q6NT89 227 aa25.53■■□□□ 1.68
CPNE1-202ENST00000352393 SEPT1Q8WYJ6 367 aa25.53■■□□□ 1.68
CPNE1-202ENST00000352393 JDP2Q8WYK2 163 aa25.53■■□□□ 1.68
CPNE1-202ENST00000352393 MCUR1Q96AQ8 359 aa25.53■■□□□ 1.68
CPNE1-202ENST00000352393 FRMD8Q9BZ67 464 aaPredicted RBP25.53■■□□□ 1.68
CPNE1-202ENST00000352393 PLAC1Q9HBJ0 212 aa25.53■■□□□ 1.68
CPNE1-202ENST00000352393 SLC24A3Q9HC58 644 aa25.53■■□□□ 1.68
CPNE1-202ENST00000352393 EIF4E1BA6NMX2 242 aaKnown RBP25.52■■□□□ 1.68
CPNE1-202ENST00000352393 M0QYV0 167 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 CXCL8P10145 99 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 ESRRAP11474 423 aaPredicted RBP25.52■■□□□ 1.68
CPNE1-202ENST00000352393 GPD2P43304 727 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 CCNHP51946 323 aaPredicted RBP25.52■■□□□ 1.68
CPNE1-202ENST00000352393 SH3PXD2AQ5TCZ1 1133 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 MICALL2Q8IY33 904 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 C1orf127Q8N9H9 656 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 C7orf26Q96N11 449 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 CNPY3Q9BT09 278 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 NMUR2Q9GZQ4 415 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 RAB6BQ9NRW1 208 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 FAM237BA0A1B0GVD1 139 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 H7C0C1 242 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 ACKR2O00590 384 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 B4GALT5O43286 388 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 IL18RAPO95256 599 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 GPD1P21695 349 aa25.52■■□□□ 1.68
CPNE1-202ENST00000352393 ATP5OP48047 213 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms