RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 KCNJ2P63252 427 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 GOLGA7BQ2TAP0 167 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 RAB6CQ53S08 254 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 HHATQ5VTY9 493 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 OLFML1Q6UWY5 402 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 MAP7D3Q8IWC1 876 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 RTP4Q96DX8 246 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 RAB6CQ9H0N0 254 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 SLCO1B3Q9NPD5 702 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 ARHGEF3Q9NR81 526 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 SETSIPP0DME0 302 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 SLC8A1P32418 973 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 MSH2P43246 934 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 CCDC14Q49A88 953 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 BOLA3Q53S33 107 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 LVRNQ6Q4G3 990 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 ZNF410Q86VK4 478 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 TAB3Q8N5C8 712 aaPredicted RBP23.09■■□□□ 1.29
UPF3A-201ENST00000351487 KLHL29Q96CT2 875 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 KATNBL1Q9H079 304 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 USH1CQ9Y6N9 552 aa23.09■■□□□ 1.29
UPF3A-201ENST00000351487 TM9SF1O15321 606 aa23.08■■□□□ 1.29
UPF3A-201ENST00000351487 SPAG6O75602 509 aa23.08■■□□□ 1.29
UPF3A-201ENST00000351487 GBP2P32456 591 aaPredicted RBP23.08■■□□□ 1.29
UPF3A-201ENST00000351487 NRLP54845 237 aa23.08■■□□□ 1.29
UPF3A-201ENST00000351487 DCAF4L1Q3SXM0 396 aa23.08■■□□□ 1.29
UPF3A-201ENST00000351487 ZC3H18Q86VM9 953 aaKnown RBP23.08■■□□□ 1.29
UPF3A-201ENST00000351487 C12orf29Q8N999 325 aa23.08■■□□□ 1.29
UPF3A-201ENST00000351487 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.08■■□□□ 1.29
UPF3A-201ENST00000351487 CYTH2Q99418 400 aa23.08■■□□□ 1.29
UPF3A-201ENST00000351487 TBCBQ99426 244 aa23.08■■□□□ 1.29
UPF3A-201ENST00000351487 SLC4A5Q9BY07 1137 aa23.08■■□□□ 1.29
UPF3A-201ENST00000351487 USP29Q9HBJ7 922 aa23.08■■□□□ 1.29
UPF3A-201ENST00000351487 NOD2Q9HC29 1040 aa23.08■■□□□ 1.29
UPF3A-201ENST00000351487 CHMP2BQ9UQN3 213 aa23.08■■□□□ 1.29
UPF3A-201ENST00000351487 DERAQ9Y315 318 aa23.08■■□□□ 1.29
UPF3A-201ENST00000351487 TEX264Q9Y6I9 313 aa23.08■■□□□ 1.29
UPF3A-201ENST00000351487 H3BRB1 525 aa23.08■■□□□ 1.28
UPF3A-201ENST00000351487 IGF2BP3O00425 579 aaKnown RBP eCLIP23.08■■□□□ 1.28
UPF3A-201ENST00000351487 TGM2P21980 687 aa23.08■■□□□ 1.28
UPF3A-201ENST00000351487 IL4RP24394 825 aa23.08■■□□□ 1.28
UPF3A-201ENST00000351487 GJA5P36382 358 aa23.08■■□□□ 1.28
UPF3A-201ENST00000351487 SNAPC2Q13487 334 aa23.08■■□□□ 1.28
UPF3A-201ENST00000351487 WLSQ5T9L3 541 aa23.08■■□□□ 1.28
UPF3A-201ENST00000351487 TUT1Q9H6E5 874 aaKnown RBP23.08■■□□□ 1.28
UPF3A-201ENST00000351487 PLEKHA5Q9HAU0 1116 aa23.08■■□□□ 1.28
UPF3A-201ENST00000351487 PAK5Q9P286 719 aa23.08■■□□□ 1.28
UPF3A-201ENST00000351487 CFAP69A5D8W1 941 aa23.07■■□□□ 1.28
UPF3A-201ENST00000351487 PIK3R2O00459 728 aa23.07■■□□□ 1.28
UPF3A-201ENST00000351487 UNC5CO95185 931 aa23.07■■□□□ 1.28
UPF3A-201ENST00000351487 CYP2C8P10632 490 aa23.07■■□□□ 1.28
UPF3A-201ENST00000351487 ADORA2AP29274 412 aa23.07■■□□□ 1.28
UPF3A-201ENST00000351487 ELK3P41970 407 aa23.07■■□□□ 1.28
UPF3A-201ENST00000351487 CCNA1P78396 465 aa23.07■■□□□ 1.28
UPF3A-201ENST00000351487 KRT81Q14533 505 aa23.07■■□□□ 1.28
UPF3A-201ENST00000351487 CDO1Q16878 200 aa23.07■■□□□ 1.28
UPF3A-201ENST00000351487 PREPLQ4J6C6 727 aaPredicted RBP23.07■■□□□ 1.28
UPF3A-201ENST00000351487 MARCH8Q5T0T0 291 aa23.07■■□□□ 1.28
UPF3A-201ENST00000351487 PPP1R26Q5T8A7 1209 aaPredicted RBP23.07■■□□□ 1.28
UPF3A-201ENST00000351487 PNMA8AQ86V59 439 aaPredicted RBP23.07■■□□□ 1.28
UPF3A-201ENST00000351487 PLD5Q8N7P1 536 aa23.07■■□□□ 1.28
UPF3A-201ENST00000351487 BANPQ8N9N5 519 aa23.07■■□□□ 1.28
UPF3A-201ENST00000351487 GPRC5AQ8NFJ5 357 aa23.07■■□□□ 1.28
UPF3A-201ENST00000351487 ADAM33Q9BZ11 813 aa23.07■■□□□ 1.28
UPF3A-201ENST00000351487 FRMD8Q9BZ67 464 aaPredicted RBP23.07■■□□□ 1.28
UPF3A-201ENST00000351487 GRAP2O75791 330 aa23.06■■□□□ 1.28
UPF3A-201ENST00000351487 ADCYAP1R1P41586 468 aa23.06■■□□□ 1.28
UPF3A-201ENST00000351487 GRIK4Q16099 956 aa23.06■■□□□ 1.28
UPF3A-201ENST00000351487 SLC9A4Q6AI14 798 aa23.06■■□□□ 1.28
UPF3A-201ENST00000351487 PMF1Q6P1K2 205 aa23.06■■□□□ 1.28
UPF3A-201ENST00000351487 ZNF467Q7Z7K2 595 aaPredicted RBP23.06■■□□□ 1.28
UPF3A-201ENST00000351487 TMEM110Q86TL2 294 aa23.06■■□□□ 1.28
UPF3A-201ENST00000351487 TTC30AQ86WT1 665 aa23.06■■□□□ 1.28
UPF3A-201ENST00000351487 IGDCC3Q8IVU1 814 aa23.06■■□□□ 1.28
UPF3A-201ENST00000351487 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.06■■□□□ 1.28
UPF3A-201ENST00000351487 RNF181Q9P0P0 153 aa23.06■■□□□ 1.28
UPF3A-201ENST00000351487 ZNF487B1APH4 448 aa23.06■■□□□ 1.28
UPF3A-201ENST00000351487 H7C0C1 242 aa23.06■■□□□ 1.28
UPF3A-201ENST00000351487 FGFR1P11362 822 aa23.06■■□□□ 1.28
UPF3A-201ENST00000351487 HOXD8P13378 290 aaPredicted RBP23.06■■□□□ 1.28
UPF3A-201ENST00000351487 ALADP13716 330 aa23.06■■□□□ 1.28
UPF3A-201ENST00000351487 ATP5OP48047 213 aa23.06■■□□□ 1.28
UPF3A-201ENST00000351487 PQLC3Q8N755 202 aa23.06■■□□□ 1.28
UPF3A-201ENST00000351487 ZC3H15Q8WU90 426 aaKnown RBP23.06■■□□□ 1.28
UPF3A-201ENST00000351487 ZNF75CPQ92670 426 aaPredicted RBP23.06■■□□□ 1.28
UPF3A-201ENST00000351487 NCAPGQ9BPX3 1015 aa23.06■■□□□ 1.28
UPF3A-201ENST00000351487 PCDH18Q9HCL0 1135 aa23.06■■□□□ 1.28
UPF3A-201ENST00000351487 CYLDQ9NQC7 956 aa23.06■■□□□ 1.28
UPF3A-201ENST00000351487 PDCD11Q14690 1871 aaKnown RBP23.06■■□□□ 1.28
UPF3A-201ENST00000351487 TCRBV9S1A1TA0A576 114 aa23.05■■□□□ 1.28
UPF3A-201ENST00000351487 APOL1O14791 398 aa23.05■■□□□ 1.28
UPF3A-201ENST00000351487 MDM4O15151 490 aa23.05■■□□□ 1.28
UPF3A-201ENST00000351487 RGS7P49802 495 aa23.05■■□□□ 1.28
UPF3A-201ENST00000351487 SLC6A3Q01959 620 aa23.05■■□□□ 1.28
UPF3A-201ENST00000351487 SETDB1Q15047 1291 aa23.05■■□□□ 1.28
UPF3A-201ENST00000351487 SESTD1Q86VW0 696 aa23.05■■□□□ 1.28
UPF3A-201ENST00000351487 ZNF276Q8N554 614 aa23.05■■□□□ 1.28
UPF3A-201ENST00000351487 SLC35F5Q8WV83 523 aa23.05■■□□□ 1.28
UPF3A-201ENST00000351487 C10orf82Q8WW14 230 aa23.05■■□□□ 1.28
UPF3A-201ENST00000351487 SLC44A1Q8WWI5 657 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms