RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 SLC13A1Q9BZW2 595 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 DPEP3Q9H4B8 488 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 GRID1Q9ULK0 1009 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 IGF2BP3O00425 579 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMPD4-201ENST00000351288 INHBAP08476 426 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 CTCFP49711 727 aaPredicted RBP10.85□□□□□ -0.67
SMPD4-201ENST00000351288 PSEN2P49810 448 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 MGAT5Q09328 741 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 SNCBQ16143 134 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 HIF1AQ16665 826 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 ACCSLQ4AC99 568 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 TFDP3Q5H9I0 405 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 FNBP1LQ5T0N5 605 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 ARFGAP1Q8N6T3 406 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 SMC6Q96SB8 1091 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 SDCBP2Q9H190 292 aa10.85□□□□□ -0.67
SMPD4-201ENST00000351288 USP15Q9Y4E8 981 aaPredicted RBP10.85□□□□□ -0.67
SMPD4-201ENST00000351288 C2orf71A6NGG8 1288 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 CYB561D2O14569 222 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 PMM2O15305 246 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 ERBB2P04626 1255 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 HMBSP08397 361 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 KLRC2P26717 231 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 MSH2P43246 934 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 SULT1E1P49888 294 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 ROR1Q01973 937 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 GHRHRQ02643 423 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 C1QBPQ07021 282 aaKnown RBP10.84□□□□□ -0.67
SMPD4-201ENST00000351288 DUSP28Q4G0W2 176 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 CGB2Q6NT52 195 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 SLC27A1Q6PCB7 646 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 SPATA21Q7Z572 469 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 YTHDF3Q7Z739 585 aaKnown RBP10.84□□□□□ -0.67
SMPD4-201ENST00000351288 KATNAL2Q8IYT4 538 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 EXD1Q8NHP7 514 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 SLC7A14Q8TBB6 771 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 KCNV2Q8TDN2 545 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 TTC17Q96AE7 1141 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 SERPINB12Q96P63 405 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 APOL2Q9BQE5 337 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 TRABDQ9H4I3 376 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 BARX2Q9UMQ3 279 aaPredicted RBP10.84□□□□□ -0.67
SMPD4-201ENST00000351288 MCF2P10911 925 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 GNAT1P11488 350 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 ATN1P54259 1190 aaPredicted RBP10.84□□□□□ -0.67
SMPD4-201ENST00000351288 SNX16P57768 344 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 ELF3P78545 371 aaPredicted RBP10.84□□□□□ -0.67
SMPD4-201ENST00000351288 MCL1Q07820 350 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 SLC1A5Q15758 541 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 MDH1BQ5I0G3 518 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 MFSD14CQ5VZR4 134 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 WSCD1Q658N2 575 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 C3orf62Q6ZUJ4 267 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 VSIG1Q86XK7 387 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 CCDC110Q8TBZ0 833 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 KLHL29Q96CT2 875 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 SGSM3Q96HU1 749 aa10.84□□□□□ -0.67
SMPD4-201ENST00000351288 XPO7Q9UIA9 1087 aaKnown RBP10.84□□□□□ -0.67
SMPD4-201ENST00000351288 PSTPIP1O43586 416 aa10.83□□□□□ -0.67
SMPD4-201ENST00000351288 TSPAN1O60635 241 aa10.83□□□□□ -0.67
SMPD4-201ENST00000351288 CDH16O75309 829 aa10.83□□□□□ -0.67
SMPD4-201ENST00000351288 KRT4P19013 534 aa10.83□□□□□ -0.67
SMPD4-201ENST00000351288 LMO2P25791 158 aa10.83□□□□□ -0.67
SMPD4-201ENST00000351288 TARSP26639 723 aaKnown RBP10.83□□□□□ -0.67
SMPD4-201ENST00000351288 ATP5DP30049 168 aa10.83□□□□□ -0.67
SMPD4-201ENST00000351288 TARBP2Q15633 366 aaKnown RBP10.83□□□□□ -0.67
SMPD4-201ENST00000351288 ZNF618Q5T7W0 954 aa10.83□□□□□ -0.67
SMPD4-201ENST00000351288 OLFML2BQ68BL8 750 aa10.83□□□□□ -0.67
SMPD4-201ENST00000351288 PPTC7Q8NI37 304 aa10.83□□□□□ -0.67
SMPD4-201ENST00000351288 CLEC4CQ8WTT0 213 aa10.83□□□□□ -0.67
SMPD4-201ENST00000351288 PGLYRP2Q96PD5 576 aa10.83□□□□□ -0.67
SMPD4-201ENST00000351288 ADGRA2Q96PE1 1338 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 CCDC195A0A1B0GUA6 201 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 RRN3P2A6NIE6 340 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 M0QYT0 321 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 LRCH4O75427 683 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 FAM155BO75949 473 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 FGFR1P11362 822 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 VDRP11473 427 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 NCAM1P13591 858 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 GCAP28676 217 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 TAF6P49848 677 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 CPT1AP50416 773 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 SCNN1GP51170 649 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 ADIGQ0VDE8 80 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 TCEAL1Q15170 157 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 FAM183BPQ6ZVS7 135 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 ILDR2Q71H61 639 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 PHF13Q86YI8 300 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-201ENST00000351288 IFT122Q9HBG6 1241 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 GPBP1L1Q9HC44 474 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-201ENST00000351288 SMYD2Q9NRG4 433 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 hCG_1818297A0A087WSY0 165 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 DNALI1O14645 258 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-201ENST00000351288 KRT16P08779 473 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 GBP1P32455 592 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 RGS2P41220 211 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 FLT3LGP49771 235 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 RAD23BP54727 409 aa10.83□□□□□ -0.68
SMPD4-201ENST00000351288 CCDC62Q6P9F0 684 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms