RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 CIITAP33076 1130 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 MSX2P35548 267 aaPredicted RBP15.95■□□□□ 0.14
LMNA-201ENST00000347559 MLH1P40692 756 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 STX3Q13277 289 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 C16orf72Q14CZ0 275 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 SPOPLQ6IQ16 392 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 PCGF5Q86SE9 256 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 NUP93Q8N1F7 819 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 FNDC8Q8TC99 324 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 SLC44A1Q8WWI5 657 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 JADE3Q92613 823 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 ZNF577Q9BSK1 485 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 TMEM8AQ9HCN3 771 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 HOMER2Q9NSB8 354 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 FETUBQ9UGM5 382 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 BARX2Q9UMQ3 279 aaPredicted RBP15.95■□□□□ 0.14
LMNA-201ENST00000347559 APOBEC2Q9Y235 224 aaKnown RBP15.95■□□□□ 0.14
LMNA-201ENST00000347559 DRG1Q9Y295 367 aaKnown RBP15.95■□□□□ 0.14
LMNA-201ENST00000347559 PLLPQ9Y342 182 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 PCDHB2Q9Y5E7 798 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 CCNT2O60583 730 aaKnown RBP15.95■□□□□ 0.14
LMNA-201ENST00000347559 NELFEP18615 380 aaKnown RBP15.95■□□□□ 0.14
LMNA-201ENST00000347559 HDAC4P56524 1084 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 TBCCQ15814 346 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 MARVELD2Q8N4S9 558 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 NAT8LQ8N9F0 302 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 FAM71DQ8N9W8 422 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 XPNPEP1Q9NQW7 623 aa15.95■□□□□ 0.14
LMNA-201ENST00000347559 TRIM43BA6NCK2 446 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 KLF11O14901 512 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 XPO1O14980 1071 aaKnown RBP15.94■□□□□ 0.14
LMNA-201ENST00000347559 TFPTP0C1Z6 253 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 GPC3P51654 580 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 PSMD7P51665 324 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 NAA20P61599 178 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 SLC10A5Q5PT55 438 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 GRAMD4Q6IC98 578 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 DCUN1D2Q6PH85 259 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 FEZF2Q8TBJ5 459 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 LRGUKQ96M69 825 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 DNAJC16Q9Y2G8 782 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 PLIN4Q96Q06 1357 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 hCG_1818297A0A087WSY0 165 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 SDR42E2A6NKP2 422 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 AP1G1O43747 822 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 ITGAVP06756 1048 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 AOC1P19801 751 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 GPSM2P81274 684 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 TFDP3Q5H9I0 405 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 POLNQ7Z5Q5 900 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 ZNF410Q86VK4 478 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 WDR75Q8IWA0 830 aaKnown RBP15.94■□□□□ 0.14
LMNA-201ENST00000347559 TRIML2Q8N7C3 387 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 MCEEQ96PE7 176 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 TRIM56Q9BRZ2 755 aaKnown RBP15.94■□□□□ 0.14
LMNA-201ENST00000347559 XAB2Q9HCS7 855 aaKnown RBP15.94■□□□□ 0.14
LMNA-201ENST00000347559 INIPQ9NRY2 104 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 LAMB2P55268 1798 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 DOT1LQ8TEK3 1739 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 H3BNX3 289 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 PEX1O43933 1283 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 UGT1A9O60656 530 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 ARP10275 920 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 KCNT1Q5JUK3 1230 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 DRICH1Q6PGQ1 229 aaPredicted RBP15.94■□□□□ 0.14
LMNA-201ENST00000347559 SH2D5Q6ZV89 423 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 PATL1Q86TB9 770 aaKnown RBP15.94■□□□□ 0.14
LMNA-201ENST00000347559 RTKN2Q8IZC4 609 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 NDUFAF2Q8N183 169 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 PQLC1Q8N2U9 271 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 MKL1Q969V6 931 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 MAML3Q96JK9 1138 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 UGT1A7Q9HAW7 530 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 UGT1A10Q9HAW8 530 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 UGT1A8Q9HAW9 530 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 SF3B1O75533 1304 aaKnown RBP eCLIP15.94■□□□□ 0.141e-6■■■■■ 97
LMNA-201ENST00000347559 NHSQ6T4R5 1651 aa15.94■□□□□ 0.14
LMNA-201ENST00000347559 ZNFX1Q9P2E3 1918 aaKnown RBP15.93■□□□□ 0.14
LMNA-201ENST00000347559 TBC1D12O60347 775 aa15.93■□□□□ 0.14
LMNA-201ENST00000347559 MRPS22P82650 360 aaKnown RBP15.93■□□□□ 0.14
LMNA-201ENST00000347559 MRPS5P82675 430 aaKnown RBP15.93■□□□□ 0.14
LMNA-201ENST00000347559 TMEM270Q6UE05 265 aa15.93■□□□□ 0.14
LMNA-201ENST00000347559 UNC45BQ8IWX7 931 aa15.93■□□□□ 0.14
LMNA-201ENST00000347559 SMYD1Q8NB12 490 aa15.93■□□□□ 0.14
LMNA-201ENST00000347559 GSDMBQ8TAX9 411 aa15.93■□□□□ 0.14
LMNA-201ENST00000347559 IRGQQ8WZA9 623 aa15.93■□□□□ 0.14
LMNA-201ENST00000347559 TMIGD2Q96BF3 282 aa15.93■□□□□ 0.14
LMNA-201ENST00000347559 TSPYL2Q9H2G4 693 aaPredicted RBP15.93■□□□□ 0.14
LMNA-201ENST00000347559 IP6K2Q9UHH9 426 aa15.93■□□□□ 0.14
LMNA-201ENST00000347559 MYH14Q7Z406 1995 aaKnown RBP15.93■□□□□ 0.14
LMNA-201ENST00000347559 CST8O60676 142 aa15.93■□□□□ 0.14
LMNA-201ENST00000347559 KRT37O76014 449 aa15.93■□□□□ 0.14
LMNA-201ENST00000347559 PDGFRBP09619 1106 aa15.93■□□□□ 0.14
LMNA-201ENST00000347559 FAM58BPP0C7Q3 252 aa15.93■□□□□ 0.14
LMNA-201ENST00000347559 CDH2P19022 906 aaPredicted RBP15.93■□□□□ 0.14
LMNA-201ENST00000347559 ALDH1B1P30837 517 aa15.93■□□□□ 0.14
LMNA-201ENST00000347559 PPP6R3Q5H9R7 873 aaPredicted RBP15.93■□□□□ 0.14
LMNA-201ENST00000347559 MROH9Q5TGP6 573 aa15.93■□□□□ 0.14
LMNA-201ENST00000347559 VWA5B1Q5TIE3 1220 aa15.93■□□□□ 0.14
LMNA-201ENST00000347559 TTC39BQ5VTQ0 682 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms