RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 SOWAHAQ2M3V2 549 aa9.71□□□□□ -0.85
ATG4A-202ENST00000345734 GOLGA7BQ2TAP0 167 aa9.71□□□□□ -0.85
ATG4A-202ENST00000345734 C11orf91Q3C1V1 193 aa9.71□□□□□ -0.85
ATG4A-202ENST00000345734 C4orf17Q53FE4 359 aa9.71□□□□□ -0.85
ATG4A-202ENST00000345734 ZNF618Q5T7W0 954 aa9.71□□□□□ -0.85
ATG4A-202ENST00000345734 RSPH3Q86UC2 560 aa9.71□□□□□ -0.85
ATG4A-202ENST00000345734 TREML1Q86YW5 311 aa9.71□□□□□ -0.85
ATG4A-202ENST00000345734 CCDC50Q8IVM0 306 aa9.71□□□□□ -0.85
ATG4A-202ENST00000345734 MEIOBQ8N635 442 aa9.71□□□□□ -0.85
ATG4A-202ENST00000345734 C1orf54Q8WWF1 131 aa9.71□□□□□ -0.85
ATG4A-202ENST00000345734 HEMGNQ9BXL5 484 aa9.71□□□□□ -0.85
ATG4A-202ENST00000345734 DPEP3Q9H4B8 488 aa9.71□□□□□ -0.85
ATG4A-202ENST00000345734 SYNCQ9H7C4 482 aa9.71□□□□□ -0.85
ATG4A-202ENST00000345734 AGO3Q9H9G7 860 aaKnown RBP9.71□□□□□ -0.85
ATG4A-202ENST00000345734 FAM49BQ9NUQ9 324 aa9.71□□□□□ -0.85
ATG4A-202ENST00000345734 CACNG4Q9UBN1 327 aa9.71□□□□□ -0.85
ATG4A-202ENST00000345734 STRIP2Q9ULQ0 834 aa9.71□□□□□ -0.85
ATG4A-202ENST00000345734 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.71□□□□□ -0.85
ATG4A-202ENST00000345734 SH3BP1Q9Y3L3 701 aa9.71□□□□□ -0.85
ATG4A-202ENST00000345734 SIGLEC16A6NMB1 481 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 PI4K2BG5E9Z4 385 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 AGPSO00116 658 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 CD4P01730 458 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 RALAP11233 206 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 FGFR1P11362 822 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 KRT3P12035 628 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 CHRNA3P32297 505 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 COILP38432 576 aaPredicted RBP9.71□□□□□ -0.86
ATG4A-202ENST00000345734 THPOP40225 353 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 AFF1P51825 1210 aaKnown RBP9.71□□□□□ -0.86
ATG4A-202ENST00000345734 CUL1Q13616 776 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 PPP2R5EQ16537 467 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 PTGISQ16647 500 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 CYP1B1Q16678 543 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 FBXO47Q5MNV8 452 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 TXNRD3NBQ6F5E7 133 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 CCDC137Q6PK04 289 aaKnown RBP9.71□□□□□ -0.86
ATG4A-202ENST00000345734 LCLAT1Q6UWP7 414 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 JAMLQ86YT9 394 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 KATNAL2Q8IYT4 538 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 TTC39CQ8N584 583 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 EMC1Q8N766 993 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 OR6B3Q8NGW1 331 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 RHBDD1Q8TEB9 315 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 KBTBD7Q8WVZ9 684 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 RIN2Q8WYP3 895 aaPredicted RBP9.71□□□□□ -0.86
ATG4A-202ENST00000345734 SEC14L1Q92503 715 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 LPPQ93052 612 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 ACSF2Q96CM8 615 aaPredicted RBP9.71□□□□□ -0.86
ATG4A-202ENST00000345734 HSH2DQ96JZ2 352 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 METTL5Q9NRN9 209 aaKnown RBP9.71□□□□□ -0.86
ATG4A-202ENST00000345734 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.71□□□□□ -0.86
ATG4A-202ENST00000345734 SRRDQ9UH36 339 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 PCYOX1Q9UHG3 505 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 MTUS1Q9ULD2 1270 aa9.71□□□□□ -0.86
ATG4A-202ENST00000345734 UTP11Q9Y3A2 253 aaKnown RBP9.71□□□□□ -0.86
ATG4A-202ENST00000345734 KPNA7A9QM74 516 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 SYF2O95926 243 aaKnown RBP9.7□□□□□ -0.86
ATG4A-202ENST00000345734 PDGFRBP09619 1106 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 ATF7P17544 494 aaPredicted RBP9.7□□□□□ -0.86
ATG4A-202ENST00000345734 PSMA2P25787 234 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 LMO2P25791 158 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 FLT3P36888 993 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 GABRB2P47870 512 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 RGS7P49802 495 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 TAP1Q03518 808 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 SNX1Q13596 522 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 DSC3Q14574 896 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 ZKSCAN8Q15776 578 aaPredicted RBP9.7□□□□□ -0.86
ATG4A-202ENST00000345734 TRIM67Q6ZTA4 783 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 RPAINQ86UA6 219 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 TTC30AQ86WT1 665 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 ATG4AQ8WYN0 398 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 ERP44Q9BS26 406 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 PLVAPQ9BX97 442 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 FAM124BQ9H5Z6 455 aaPredicted RBP9.7□□□□□ -0.86
ATG4A-202ENST00000345734 TRMT13Q9NUP7 481 aaKnown RBP9.7□□□□□ -0.86
ATG4A-202ENST00000345734 FAM105AQ9NUU6 356 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 TOR4AQ9NXH8 423 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 KIAA1257Q9ULG3 409 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 R3HDM2Q9Y2K5 976 aaKnown RBP9.7□□□□□ -0.86
ATG4A-202ENST00000345734 FAM187AA6NFU0 413 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 A8MXQ7 604 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 E5RJQ4 531 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 CD52P31358 61 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 MLH1P40692 756 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 AARSP49588 968 aaKnown RBP eCLIP9.7□□□□□ -0.86
ATG4A-202ENST00000345734 GYS2P54840 703 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 GSCP56915 257 aaPredicted RBP9.7□□□□□ -0.86
ATG4A-202ENST00000345734 PLCB3Q01970 1234 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 DHX34Q14147 1143 aaKnown RBP9.7□□□□□ -0.86
ATG4A-202ENST00000345734 PIGHQ14442 188 aaPredicted RBP9.7□□□□□ -0.86
ATG4A-202ENST00000345734 ZNF268Q14587 947 aaPredicted RBP9.7□□□□□ -0.86
ATG4A-202ENST00000345734 DUPD1Q68J44 220 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 PMF1Q6P1K2 205 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 PRICKLE2Q7Z3G6 844 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 CCDC91Q7Z6B0 441 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 ARFGAP1Q8N6T3 406 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 NIPA2Q8N8Q9 360 aa9.7□□□□□ -0.86
ATG4A-202ENST00000345734 C12orf50Q8NA57 414 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms