RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 NFIAQ12857 509 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 TMEM63BQ5T3F8 832 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 UBASH3BQ8TF42 649 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 TCF7L2Q9NQB0 619 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 PCSK1P29120 753 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 NT5C1AQ9BXI3 368 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 SLITRK2Q9H156 845 aa19.99■□□□□ 0.79
HDAC4-201ENST00000345617 PNPLA7Q6ZV29 1317 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 E9PBE3 544 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 RAD51BO15315 384 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 FCER1AP12319 257 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 GYS1P13807 737 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 THOC7Q6I9Y2 204 aaKnown RBP19.98■□□□□ 0.79
HDAC4-201ENST00000345617 ZCCHC8Q6NZY4 707 aaKnown RBP19.98■□□□□ 0.79
HDAC4-201ENST00000345617 COMTP21964 271 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 MROH9Q5TGP6 573 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 AKAP7Q9P0M2 348 aaPredicted RBP19.98■□□□□ 0.79
HDAC4-201ENST00000345617 DPYSL4O14531 572 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 MYBPC2Q14324 1141 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 ING3Q9NXR8 418 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 CRNNQ9UBG3 495 aaPredicted RBP19.98■□□□□ 0.79
HDAC4-201ENST00000345617 ATP6V1HQ9UI12 483 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 GTF3C4Q9UKN8 822 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 DYRK3O43781 588 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 AQP5P55064 265 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 LRRC34Q8IZ02 419 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 VPS26AO75436 327 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 HK2P52789 917 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 ALDH6A1Q02252 535 aaKnown RBP19.98■□□□□ 0.79
HDAC4-201ENST00000345617 C11orf63Q6NUN7 778 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 TUBE1Q9UJT0 475 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 FLT3P36888 993 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 ROR2Q01974 943 aaKnown RBP19.98■□□□□ 0.79
HDAC4-201ENST00000345617 NFIL3Q16649 462 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 ASB2Q96Q27 587 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 MOSPD1Q9UJG1 213 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 F5H423 210 aaPredicted RBP19.98■□□□□ 0.79
HDAC4-201ENST00000345617 PABPC1P11940 636 aaKnown RBP19.98■□□□□ 0.79
HDAC4-201ENST00000345617 NAA30Q147X3 362 aaPredicted RBP19.98■□□□□ 0.79
HDAC4-201ENST00000345617 SF3B3Q15393 1217 aaKnown RBP19.98■□□□□ 0.79
HDAC4-201ENST00000345617 NOA1Q8NC60 698 aaKnown RBP19.98■□□□□ 0.79
HDAC4-201ENST00000345617 C17orf75Q9HAS0 396 aa19.98■□□□□ 0.79
HDAC4-201ENST00000345617 DGCR14Q96DF8 476 aaKnown RBP19.97■□□□□ 0.79
HDAC4-201ENST00000345617 SPASTQ9UBP0 616 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 ATG16L2Q8NAA4 619 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 KLHL11Q9NVR0 708 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 PLAGL2Q9UPG8 496 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 MADDQ8WXG6 1647 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 CCNG1P51959 295 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 NAB1Q13506 487 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 LIN54Q6MZP7 749 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 AMER2Q8N7J2 671 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 ING4Q9UNL4 249 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 SHOC2Q9UQ13 582 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 RPS6KL1Q9Y6S9 549 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 USP32Q8NFA0 1604 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 RPS6KA5O75582 802 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 RARBP10826 455 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 AKR1B1P15121 316 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 TMEM120AQ9BXJ8 343 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 ACAD9Q9H845 621 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 MPOP05164 745 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 CYP2C8P10632 490 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 ADGRF4Q8IZF3 695 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 GANQ9H2C0 597 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 TGM3Q08188 693 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 NFX1Q12986 1120 aaKnown RBP19.97■□□□□ 0.79
HDAC4-201ENST00000345617 SLC20A1Q8WUM9 679 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 CPA5Q8WXQ8 436 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.97■□□□□ 0.792e-6■■■■■ 38.2
HDAC4-201ENST00000345617 DYNC1LI2O43237 492 aaPredicted RBP19.97■□□□□ 0.79
HDAC4-201ENST00000345617 SNAP91O60641 907 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 GALNTL6Q49A17 601 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 MZT2AQ6P582 158 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 SPON2Q9BUD6 331 aa19.97■□□□□ 0.79
HDAC4-201ENST00000345617 SAGE2PA6NJ88 616 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 MYL12BO14950 172 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 ALDH1A2O94788 518 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 S100A1P23297 94 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 ACLYP53396 1101 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 CSE1LP55060 971 aaKnown RBP19.96■□□□□ 0.79
HDAC4-201ENST00000345617 TIGD7Q6NT04 549 aaPredicted RBP19.96■□□□□ 0.79
HDAC4-201ENST00000345617 SPATA2LQ8IUW3 424 aaPredicted RBP19.96■□□□□ 0.79
HDAC4-201ENST00000345617 TBC1D10CQ8IV04 446 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 C1orf131Q8NDD1 294 aaKnown RBP19.96■□□□□ 0.79
HDAC4-201ENST00000345617 TOP3AQ13472 1001 aaPredicted RBP19.96■□□□□ 0.79
HDAC4-201ENST00000345617 SLC13A5Q86YT5 568 aaPredicted RBP19.96■□□□□ 0.79
HDAC4-201ENST00000345617 STK32AQ8WU08 396 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 CCDC59Q9P031 241 aaKnown RBP19.96■□□□□ 0.79
HDAC4-201ENST00000345617 ALG6Q9Y672 507 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 KLHL18O94889 574 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 ALOX15P16050 662 aaPredicted RBP19.96■□□□□ 0.79
HDAC4-201ENST00000345617 RCVRNP35243 200 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 SH3BP5LQ7L8J4 393 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 OR7A2PQ8NGA2 310 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 GABBR1Q9UBS5 961 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 RPL26L1Q9UNX3 145 aaKnown RBP19.96■□□□□ 0.79
HDAC4-201ENST00000345617 GSTK1Q9Y2Q3 226 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 V9GYQ6 96 aa19.96■□□□□ 0.79
HDAC4-201ENST00000345617 GUCY1B2O75343 617 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms