RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 ARHGEF16Q5VV41 709 aa18.53■□□□□ 0.56
VHL-202ENST00000345392 SWSAP1Q6NVH7 229 aa18.53■□□□□ 0.56
VHL-202ENST00000345392 ZCCHC23Q6ZST2 131 aa18.53■□□□□ 0.56
VHL-202ENST00000345392 RFX6Q8HWS3 928 aa18.53■□□□□ 0.56
VHL-202ENST00000345392 JOSD2Q8TAC2 188 aa18.53■□□□□ 0.56
VHL-202ENST00000345392 LRCH4O75427 683 aa18.52■□□□□ 0.56
VHL-202ENST00000345392 RBP3P10745 1247 aa18.52■□□□□ 0.56
VHL-202ENST00000345392 KDELR1P24390 212 aa18.52■□□□□ 0.56
VHL-202ENST00000345392 MRPS5P82675 430 aaKnown RBP18.52■□□□□ 0.56
VHL-202ENST00000345392 SLC25A11Q02978 314 aaKnown RBP18.52■□□□□ 0.56
VHL-202ENST00000345392 NCOA4Q13772 614 aa18.52■□□□□ 0.56
VHL-202ENST00000345392 FAM91A1Q658Y4 838 aa18.52■□□□□ 0.56
VHL-202ENST00000345392 NPNTQ6UXI9 565 aa18.52■□□□□ 0.56
VHL-202ENST00000345392 EMC1Q8N766 993 aa18.52■□□□□ 0.56
VHL-202ENST00000345392 NDNQ99608 321 aa18.52■□□□□ 0.56
VHL-202ENST00000345392 PDCD2LQ9BRP1 358 aa18.52■□□□□ 0.56
VHL-202ENST00000345392 SMYD3Q9H7B4 428 aa18.52■□□□□ 0.56
VHL-202ENST00000345392 ARHGAP28Q9P2N2 729 aa18.52■□□□□ 0.56
VHL-202ENST00000345392 SEPT9Q9UHD8 586 aaPredicted RBP18.52■□□□□ 0.56
VHL-202ENST00000345392 FZD1Q9UP38 647 aa18.52■□□□□ 0.56
VHL-202ENST00000345392 CNTN6Q9UQ52 1028 aa18.52■□□□□ 0.56
VHL-202ENST00000345392 PCDHA10Q9Y5I2 948 aa18.52■□□□□ 0.56
VHL-202ENST00000345392 COL4A5P29400 1685 aa18.52■□□□□ 0.56
VHL-202ENST00000345392 ARHGAP42A6NI28 874 aa18.52■□□□□ 0.55
VHL-202ENST00000345392 UGT1A9O60656 530 aa18.52■□□□□ 0.55
VHL-202ENST00000345392 SORBS2O94875 1100 aaKnown RBP18.52■□□□□ 0.55
VHL-202ENST00000345392 TBXAS1P24557 533 aaPredicted RBP18.52■□□□□ 0.55
VHL-202ENST00000345392 SLC25A3Q00325 362 aa18.52■□□□□ 0.55
VHL-202ENST00000345392 DYNC1I2Q13409 638 aaKnown RBP18.52■□□□□ 0.55
VHL-202ENST00000345392 BBS12Q6ZW61 710 aa18.52■□□□□ 0.55
VHL-202ENST00000345392 CCDC106Q9BWC9 280 aa18.52■□□□□ 0.55
VHL-202ENST00000345392 DEFB129Q9H1M3 183 aa18.52■□□□□ 0.55
VHL-202ENST00000345392 UGT1A7Q9HAW7 530 aa18.52■□□□□ 0.55
VHL-202ENST00000345392 UGT1A10Q9HAW8 530 aa18.52■□□□□ 0.55
VHL-202ENST00000345392 UGT1A8Q9HAW9 530 aa18.52■□□□□ 0.55
VHL-202ENST00000345392 PLLPQ9Y342 182 aa18.52■□□□□ 0.55
VHL-202ENST00000345392 TEX264Q9Y6I9 313 aa18.52■□□□□ 0.55
VHL-202ENST00000345392 KLF11O14901 512 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 BUD23O43709 281 aaKnown RBP18.51■□□□□ 0.55
VHL-202ENST00000345392 TOP3BO95985 862 aaKnown RBP18.51■□□□□ 0.55
VHL-202ENST00000345392 PYGLP06737 847 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 ASNSP08243 561 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 SFNP31947 248 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 CDK7P50613 346 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 IRX4P78413 519 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 KRT76Q01546 638 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 LPCAT4Q643R3 524 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 RASSF3Q86WH2 238 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 DRAXINQ8NBI3 349 aaPredicted RBP18.51■□□□□ 0.55
VHL-202ENST00000345392 TMEM35BQ8NCS4 154 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 USP6NLQ92738 828 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 WWP1Q9H0M0 922 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 C17orf75Q9HAS0 396 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 OPHN1O60890 802 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 EGFRP00533 1210 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 PDE1BQ01064 536 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 SLC26A11Q86WA9 606 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 NUDCD3Q8IVD9 361 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 SPATA18Q8TC71 538 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 TFAP2BQ92481 460 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 HSPH1Q92598 858 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 PPP2R3CQ969Q6 453 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 TMEM143Q96AN5 459 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 CALN1Q9BXU9 219 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 PXMP2Q9NR77 195 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 DOCK5Q9H7D0 1870 aa18.51■□□□□ 0.55
VHL-202ENST00000345392 STAM2O75886 525 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 IL1BP01584 269 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 C6orf222P0C671 652 aaPredicted RBP18.5■□□□□ 0.55
VHL-202ENST00000345392 SPATA31D3P0C874 917 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 BAATQ14032 418 aaPredicted RBP18.5■□□□□ 0.55
VHL-202ENST00000345392 TTC39BQ5VTQ0 682 aaPredicted RBP18.5■□□□□ 0.55
VHL-202ENST00000345392 RNF111Q6ZNA4 994 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 SPATA31D4Q6ZUB0 917 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 MCF2L2Q86YR7 1114 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 POU5F2Q8N7G0 328 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 KCTD6Q8NC69 237 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 C7orf26Q96N11 449 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 GMLQ99445 158 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 TARS2Q9BW92 718 aaKnown RBP18.5■□□□□ 0.55
VHL-202ENST00000345392 COL2A1P02458 1487 aaPredicted RBP18.5■□□□□ 0.55
VHL-202ENST00000345392 A0A088AWK7 358 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 A0A0B4J269 797 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.5■□□□□ 0.55
VHL-202ENST00000345392 PLA2G6O60733 806 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 RANBP1P43487 201 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 ZNF132P52740 706 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 MTERF2Q49AM1 385 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 DNAL1Q4LDG9 190 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 SFT2D3Q587I9 215 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 RALGPS1Q5JS13 557 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 FAXCQ5TGI0 409 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 SCARA5Q6ZMJ2 495 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 SESTD1Q86VW0 696 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 TTC13Q8NBP0 860 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 HIPK4Q8NE63 616 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 TRIM56Q9BRZ2 755 aaKnown RBP18.5■□□□□ 0.55
VHL-202ENST00000345392 MSTO1Q9BUK6 570 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 SLC38A10Q9HBR0 1119 aa18.5■□□□□ 0.55
VHL-202ENST00000345392 CTDP1Q9Y5B0 961 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms