RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 TAF10Q12962 218 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 SRSF5Q13243 272 aaKnown RBP13.18□□□□□ -0.3
SGCA-202ENST00000344627 ORC1Q13415 861 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 BYSLQ13895 437 aaKnown RBP13.18□□□□□ -0.3
SGCA-202ENST00000344627 DMC1Q14565 340 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 PLK5Q496M5 336 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 NUDT18Q6ZVK8 323 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 SV2AQ7L0J3 742 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 ACOT1Q86TX2 421 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 NUP93Q8N1F7 819 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 PDZD8Q8NEN9 1154 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 KCNV2Q8TDN2 545 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 FBXO32Q969P5 355 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 OTUB2Q96DC9 234 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 COMMD8Q9NX08 183 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 SMPD4Q9NXE4 827 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 TBC1D14Q9P2M4 693 aa13.18□□□□□ -0.3
SGCA-202ENST00000344627 MYOFQ9NZM1 2061 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 FAM237AA0A1B0GTK4 181 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 ZNF840PA6NDX5 716 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.17□□□□□ -0.3
SGCA-202ENST00000344627 LEFTY2O00292 366 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 TM4SF5O14894 197 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 AP1G2O75843 785 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 RTN3O95197 1032 aaPredicted RBP13.17□□□□□ -0.3
SGCA-202ENST00000344627 HLA-DRAP01903 254 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 TRIM49P0CI25 452 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 TRIM49CP0CI26 452 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 TRIM21P19474 475 aaKnown RBP13.17□□□□□ -0.3
SGCA-202ENST00000344627 MPLP40238 635 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 DGKEP52429 567 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 CLDN10P78369 228 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 ADAM9Q13443 819 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 ZACNQ401N2 412 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 SPDYCQ5MJ68 293 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 SPOPLQ6IQ16 392 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 KBTBD6Q86V97 674 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 FAM186BQ8IYM0 893 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 CCDC150Q8NCX0 1101 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 RPLP0P6Q8NHW5 317 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 CHFRQ96EP1 664 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 KCNK16Q96T55 309 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 IMPG2Q9BZV3 1241 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 SDCBP2Q9H190 292 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 LINC00597Q9H2U6 94 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 VRTNQ9H8Y1 702 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 C2orf42Q9NWW7 574 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 ANGPTL2Q9UKU9 493 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 TRAF3IP3Q9Y228 551 aa13.17□□□□□ -0.3
SGCA-202ENST00000344627 SCAMP3O14828 347 aaKnown RBP13.16□□□□□ -0.3
SGCA-202ENST00000344627 IKBKBO14920 756 aa13.16□□□□□ -0.3
SGCA-202ENST00000344627 OLFM2O95897 454 aa13.16□□□□□ -0.3
SGCA-202ENST00000344627 MBL2P11226 248 aaPredicted RBP13.16□□□□□ -0.3
SGCA-202ENST00000344627 CCDC130P13994 396 aa13.16□□□□□ -0.3
SGCA-202ENST00000344627 PSMC2P35998 433 aaKnown RBP13.16□□□□□ -0.3
SGCA-202ENST00000344627 GCLMP48507 274 aa13.16□□□□□ -0.3
SGCA-202ENST00000344627 NDST1P52848 882 aa13.16□□□□□ -0.3
SGCA-202ENST00000344627 STPG1Q5TH74 334 aa13.16□□□□□ -0.3
SGCA-202ENST00000344627 DAB2IPQ5VWQ8 1189 aa13.16□□□□□ -0.3
SGCA-202ENST00000344627 NAIF1Q69YI7 327 aaPredicted RBP13.16□□□□□ -0.3
SGCA-202ENST00000344627 INTS8Q75QN2 995 aaKnown RBP13.16□□□□□ -0.3
SGCA-202ENST00000344627 FAM35AQ86V20 835 aa13.16□□□□□ -0.3
SGCA-202ENST00000344627 GUF1Q8N442 669 aaKnown RBP13.16□□□□□ -0.3
SGCA-202ENST00000344627 TSTD1Q8NFU3 115 aa13.16□□□□□ -0.3
SGCA-202ENST00000344627 TAF4BQ92750 862 aa13.16□□□□□ -0.3
SGCA-202ENST00000344627 EEF2KMTQ96G04 330 aa13.16□□□□□ -0.3
SGCA-202ENST00000344627 SMARCD1Q96GM5 515 aa13.16□□□□□ -0.3
SGCA-202ENST00000344627 CNOT6LQ96LI5 555 aaKnown RBP13.16□□□□□ -0.3
SGCA-202ENST00000344627 LSM14BQ9BX40 385 aaKnown RBP13.16□□□□□ -0.3
SGCA-202ENST00000344627 RNF38Q9H0F5 515 aa13.16□□□□□ -0.3
SGCA-202ENST00000344627 DUSP15Q9H1R2 295 aaPredicted RBP13.16□□□□□ -0.3
SGCA-202ENST00000344627 FBRSL1Q9HCM7 1045 aaKnown RBP13.16□□□□□ -0.3
SGCA-202ENST00000344627 KRT82Q9NSB4 513 aa13.16□□□□□ -0.3
SGCA-202ENST00000344627 TMEM30AQ9NV96 361 aa13.16□□□□□ -0.3
SGCA-202ENST00000344627 CHORDC1Q9UHD1 332 aaPredicted RBP13.16□□□□□ -0.3
SGCA-202ENST00000344627 CPQQ9Y646 472 aa13.16□□□□□ -0.3
SGCA-202ENST00000344627 A0A0A0MRY4 1105 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 BCLAF3A2AJT9 711 aaKnown RBP13.15□□□□□ -0.3
SGCA-202ENST00000344627 GDF9O60383 454 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 CAVIN2O95810 425 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 ADH1CP00326 375 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 PXNP49023 591 aaPredicted RBP13.15□□□□□ -0.3
SGCA-202ENST00000344627 TUBP50607 506 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 MAP3K7CLP57077 242 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 PNOCQ13519 176 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 ST3GAL2Q16842 350 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 RNF43Q68DV7 783 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 PKN3Q6P5Z2 889 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 TRMT11Q7Z4G4 463 aaKnown RBP13.15□□□□□ -0.3
SGCA-202ENST00000344627 FILIP1Q7Z7B0 1213 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 RASSF3Q86WH2 238 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 SMYD4Q8IYR2 804 aaPredicted RBP13.15□□□□□ -0.3
SGCA-202ENST00000344627 ADGRG2Q8IZP9 1017 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 SCAMP5Q8TAC9 235 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 SLC2A14Q8TDB8 520 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 USP33Q8TEY7 942 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 TMEM174Q8WUU8 243 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 JAKMIP2Q96AA8 810 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 DNAI2Q9GZS0 605 aa13.15□□□□□ -0.3
SGCA-202ENST00000344627 NACA2Q9H009 215 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms