RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 PDGFRAP16234 1089 aa17.14■□□□□ 0.33
CEACAM1-202ENST00000344391 ACAP1Q15027 740 aa17.14■□□□□ 0.33
CEACAM1-202ENST00000344391 DAB2IPQ5VWQ8 1189 aa17.14■□□□□ 0.33
CEACAM1-202ENST00000344391 PM20D1Q6GTS8 502 aa17.14■□□□□ 0.33
CEACAM1-202ENST00000344391 CC2D1AQ6P1N0 951 aaPredicted RBP17.14■□□□□ 0.33
CEACAM1-202ENST00000344391 TNS4Q8IZW8 715 aa17.14■□□□□ 0.33
CEACAM1-202ENST00000344391 TTC9BQ8N6N2 239 aa17.14■□□□□ 0.33
CEACAM1-202ENST00000344391 KRT35Q92764 455 aa17.14■□□□□ 0.33
CEACAM1-202ENST00000344391 CNPY3Q9BT09 278 aa17.14■□□□□ 0.33
CEACAM1-202ENST00000344391 MRPL17Q9NRX2 175 aaKnown RBP17.14■□□□□ 0.33
CEACAM1-202ENST00000344391 USTQ9Y2C2 406 aa17.14■□□□□ 0.33
CEACAM1-202ENST00000344391 RWDD3Q9Y3V2 267 aa17.14■□□□□ 0.33
CEACAM1-202ENST00000344391 GREB1Q4ZG55 1949 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 GRXCR1A8MXD5 290 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 CES2O00748 559 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 DPYSL4O14531 572 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 SART1O43290 800 aaKnown RBP17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 HSF2BPO75031 334 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 ABLIM3O94929 683 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 USP17L7P0C7H9 530 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 CTSAP10619 480 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 CTNNB1P35222 781 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 MARCKSL1P49006 195 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 SLC5A3P53794 718 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 TAS2R40P59535 323 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 YWHAZP63104 245 aaKnown RBP17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 DUSP4Q13115 394 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 DDR2Q16832 855 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 WHAMMP3Q1A5X7 153 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 CCDC14Q49A88 953 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 FAM109BQ6ICB4 259 aaPredicted RBP17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 BHLHA9Q7RTU4 235 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 CREG2Q8IUH2 290 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 ARFGAP1Q8N6T3 406 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 UBL4BQ8N7F7 174 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 ZNF461Q8TAF7 563 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 AUTS2Q8WXX7 1259 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 IRGQQ8WZA9 623 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 ALG3Q92685 438 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 PBKQ96KB5 322 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 PLVAPQ9BX97 442 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 RXFP1Q9HBX9 757 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 FNIP2Q9P278 1114 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 AFF4Q9UHB7 1163 aaKnown RBP17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 SLC27A5Q9Y2P5 690 aa17.13■□□□□ 0.33
CEACAM1-202ENST00000344391 ZNF638Q14966 1978 aaKnown RBP17.12■□□□□ 0.33
CEACAM1-202ENST00000344391 MYOGP15173 224 aa17.12■□□□□ 0.33
CEACAM1-202ENST00000344391 DNAJB2P25686 324 aa17.12■□□□□ 0.33
CEACAM1-202ENST00000344391 GPR15P49685 360 aa17.12■□□□□ 0.33
CEACAM1-202ENST00000344391 RAB33AQ14088 237 aa17.12■□□□□ 0.33
CEACAM1-202ENST00000344391 TPGS2Q68CL5 300 aa17.12■□□□□ 0.33
CEACAM1-202ENST00000344391 SCAMP5Q8TAC9 235 aa17.12■□□□□ 0.33
CEACAM1-202ENST00000344391 DDX23Q9BUQ8 820 aaKnown RBP17.12■□□□□ 0.33
CEACAM1-202ENST00000344391 CARD9Q9H257 536 aa17.12■□□□□ 0.33
CEACAM1-202ENST00000344391 LZTS1Q9Y250 596 aa17.12■□□□□ 0.33
CEACAM1-202ENST00000344391 SSX2IPQ9Y2D8 614 aa17.12■□□□□ 0.33
CEACAM1-202ENST00000344391 YJEFN3A6XGL0 299 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 E7ENQ6 273 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 PSTPIP1O43586 416 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 LRCH4O75427 683 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 DAB1O75553 588 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 ARHGEF15O94989 841 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 SDC4P31431 198 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 PTPN9P43378 593 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 MGAT5BQ3V5L5 792 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 DCAF12L1Q5VU92 463 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 SDHAF4Q5VUM1 108 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 HFE2Q6ZVN8 426 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 RHOT1Q8IXI2 618 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 DEFB106AQ8N104 65 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 NUP93Q8N1F7 819 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 FAM149B1Q96BN6 582 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 CAPZA3Q96KX2 299 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 SPATA17Q96L03 361 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 CFAP57Q96MR6 1250 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 SLC2A13Q96QE2 648 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 SEPT5Q99719 369 aaPredicted RBP17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 C17orf80Q9BSJ5 609 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 C11orf84Q9BUA3 381 aaPredicted RBP17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 HSFX1Q9UBD0 423 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 MYO16Q9Y6X6 1858 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 PLXNA3P51805 1871 aa17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 COL4A4P53420 1690 aaPredicted RBP17.11■□□□□ 0.33
CEACAM1-202ENST00000344391 C5orf67F2Z3F1 127 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 SOAT2O75908 522 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 RNF8O76064 485 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 FYNP06241 537 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 ATF2P15336 505 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 TCF4P15884 667 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 MATKP42679 507 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 RPL10AP62906 217 aaKnown RBP17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 CREMQ03060 361 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 C15orf59Q2T9L4 293 aaPredicted RBP17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 SH3PXD2AQ5TCZ1 1133 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 LRRC38Q5VT99 294 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 GDF15Q99988 308 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 CARD6Q9BX69 1037 aa17.1■□□□□ 0.33
CEACAM1-202ENST00000344391 POPDC2Q9HBU9 364 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms