RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 E7ENQ6 273 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 BANF1O75531 89 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 NPM3O75607 178 aaKnown RBP11.29□□□□□ -0.6
RPL28-201ENST00000344063 USP1O94782 785 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 S100BP04271 92 aaPredicted RBP11.29□□□□□ -0.6
RPL28-201ENST00000344063 VDRP11473 427 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 ETS1P14921 441 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 ACADSBP45954 432 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 EFTUD2Q15029 972 aaKnown RBP eCLIP11.29□□□□□ -0.64e-6■■■□□ 17.1
RPL28-201ENST00000344063 UGP2Q16851 508 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 RNF43Q68DV7 783 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 MFSD7Q6UXD7 560 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 ZBTB46Q86UZ6 589 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 MYLK4Q86YV6 388 aaPredicted RBP11.29□□□□□ -0.6
RPL28-201ENST00000344063 KIAA2013Q8IYS2 634 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 UBA3Q8TBC4 463 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 OXNAD1Q96HP4 312 aaPredicted RBP11.29□□□□□ -0.6
RPL28-201ENST00000344063 CNPY3Q9BT09 278 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 DEFB129Q9H1M3 183 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 VAV3Q9UKW4 847 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 BAG5Q9UL15 447 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 CDY2AQ9Y6F7 541 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 CDY1Q9Y6F8 540 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 KCPQ6ZWJ8 1503 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 FSCN2O14926 492 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 ATP9BO43861 1147 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 POLBP06746 335 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 SP100P23497 879 aaPredicted RBP11.29□□□□□ -0.6
RPL28-201ENST00000344063 PMLP29590 882 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 MYL6P60660 151 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 FMO1Q01740 532 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 PPIDQ08752 370 aaKnown RBP11.29□□□□□ -0.6
RPL28-201ENST00000344063 PDK1Q15118 436 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 ASTE1Q2TB18 679 aaPredicted RBP11.29□□□□□ -0.6
RPL28-201ENST00000344063 TWF2Q6IBS0 349 aaKnown RBP11.29□□□□□ -0.6
RPL28-201ENST00000344063 CCNJLQ8IV13 435 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 C12orf56Q8IXR9 622 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 ZNF483Q8TF39 744 aaPredicted RBP11.29□□□□□ -0.6
RPL28-201ENST00000344063 EPAS1Q99814 870 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 MAGEB5Q9BZ81 275 aa11.29□□□□□ -0.6
RPL28-201ENST00000344063 E9PBE3 544 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 PEX1O43933 1283 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 KLHL41O60662 606 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 SLC4A1P02730 911 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 CYP2C8P10632 490 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 RPS12P25398 132 aaKnown RBP11.28□□□□□ -0.6
RPL28-201ENST00000344063 PSEN1P49768 467 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 ADARP55265 1226 aaKnown RBP11.28□□□□□ -0.6
RPL28-201ENST00000344063 IL31Q6EBC2 164 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 TMPRSS6Q8IU80 811 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 ZNF786Q8N393 782 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 ATP6V1E2Q96A05 226 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 PRPF18Q99633 342 aaKnown RBP11.28□□□□□ -0.6
RPL28-201ENST00000344063 ADNPQ9H2P0 1102 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 V9GYQ6 96 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 FAM237BA0A1B0GVD1 139 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 ANKRD63C9JTQ0 380 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 ITGB3P05106 788 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 VCAM1P19320 739 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 TCF7P36402 384 aaPredicted RBP11.28□□□□□ -0.6
RPL28-201ENST00000344063 SULT1E1P49888 294 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 TPI1P60174 286 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 CDC42EP1Q00587 391 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 PLOD1Q02809 727 aaPredicted RBP11.28□□□□□ -0.6
RPL28-201ENST00000344063 MPZL3Q6UWV2 235 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 UCMAQ8WVF2 138 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 NAT9Q9BTE0 207 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 MRGBPQ9NV56 204 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 DNPEPQ9ULA0 475 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 C2orf71A6NGG8 1288 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 RPL10AP62906 217 aaKnown RBP11.28□□□□□ -0.6
RPL28-201ENST00000344063 ATP1A4Q13733 1029 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 EFCAB12Q6NXP0 572 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 SETD3Q86TU7 594 aaPredicted RBP11.28□□□□□ -0.6
RPL28-201ENST00000344063 USP13Q92995 863 aaPredicted RBP11.28□□□□□ -0.6
RPL28-201ENST00000344063 ZNF570Q96NI8 536 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 C12orf65Q9H3J6 166 aaKnown RBP11.28□□□□□ -0.6
RPL28-201ENST00000344063 DENND2DQ9H6A0 471 aaPredicted RBP11.28□□□□□ -0.6
RPL28-201ENST00000344063 IL1RL2Q9HB29 575 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 TCRBV7S2A1N4TA0A589 114 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 ADAMTS3O15072 1205 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 PSMD3O43242 534 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 GLRA3O75311 464 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 SMNDC1O75940 238 aaKnown RBP eCLIP11.28□□□□□ -0.6
RPL28-201ENST00000344063 ABHD2P08910 425 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 RAG1P15918 1043 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 FDFT1P37268 417 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 BACE1P56817 501 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 ZNF268Q14587 947 aaPredicted RBP11.28□□□□□ -0.6
RPL28-201ENST00000344063 PPP1R15BQ5SWA1 713 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.28□□□□□ -0.6
RPL28-201ENST00000344063 SLC10A4Q96EP9 437 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 OTUD5Q96G74 571 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 TRIM62Q9BVG3 475 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 PALMDQ9NP74 551 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 STX18Q9P2W9 335 aaKnown RBP11.28□□□□□ -0.6
RPL28-201ENST00000344063 USP18Q9UMW8 372 aa11.28□□□□□ -0.6
RPL28-201ENST00000344063 DDX3YO15523 660 aaKnown RBP11.27□□□□□ -0.6
RPL28-201ENST00000344063 SH3BP5O60239 455 aa11.27□□□□□ -0.6
RPL28-201ENST00000344063 ADRB2P07550 413 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms