RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 CATSPER2Q96P56 530 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 MECRQ9BV79 373 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 IQCGQ9H095 443 aaKnown RBP10.06□□□□□ -0.8
HOXA1-201ENST00000343060 TIMMDC1Q9NPL8 285 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 ANKEF1Q9NU02 776 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 MEI4A8MW99 385 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 RFPL1O75677 317 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 GDF11O95390 407 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 LSM8O95777 96 aaKnown RBP10.06□□□□□ -0.8
HOXA1-201ENST00000343060 SNRPAP09012 282 aaKnown RBP10.06□□□□□ -0.8
HOXA1-201ENST00000343060 ALDH18A1P54886 795 aaKnown RBP10.06□□□□□ -0.8
HOXA1-201ENST00000343060 JAG1P78504 1218 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 PLCB3Q01970 1234 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 SLC25A11Q02978 314 aaKnown RBP10.06□□□□□ -0.8
HOXA1-201ENST00000343060 DMP1Q13316 513 aaPredicted RBP10.06□□□□□ -0.8
HOXA1-201ENST00000343060 UBAP2LQ14157 1087 aaKnown RBP10.06□□□□□ -0.8
HOXA1-201ENST00000343060 KCNJ11Q14654 390 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 BORAQ6PGQ7 559 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 CCDC33Q8N5R6 958 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 ZFRQ96KR1 1074 aaKnown RBP10.06□□□□□ -0.8
HOXA1-201ENST00000343060 APOBEC3GQ9HC16 384 aaKnown RBP10.06□□□□□ -0.8
HOXA1-201ENST00000343060 KCNH7Q9NS40 1196 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 CLIC5Q9NZA1 410 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 ARHGAP28Q9P2N2 729 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 COL2A1P02458 1487 aaPredicted RBP10.06□□□□□ -0.8
HOXA1-201ENST00000343060 LY75O60449 1722 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 A0A0J9YVX5 310 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 HNRNPRO43390 633 aaKnown RBP10.05□□□□□ -0.8
HOXA1-201ENST00000343060 KRT37O76014 449 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 VNN1O95497 513 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 BPGMP07738 259 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 CD48P09326 243 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 SETSIPP0DME0 302 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 DESP17661 470 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 PRKCHP24723 683 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 FDFT1P37268 417 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 CRKP46108 304 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 SCNN1BP51168 640 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 HSD17B4P51659 736 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 UGCGQ16739 394 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.05□□□□□ -0.8
HOXA1-201ENST00000343060 ZFYVE27Q5T4F4 411 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 DNAJC24Q6P3W2 148 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 TMC7Q7Z402 723 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 RSAD2Q8WXG1 361 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 BSNDQ8WZ55 320 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 NMD3Q96D46 503 aaKnown RBP10.05□□□□□ -0.8
HOXA1-201ENST00000343060 MCEEQ96PE7 176 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 KIFC3Q9BVG8 833 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 MRIQ9BWK5 157 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 MRPS26Q9BYN8 205 aaKnown RBP10.05□□□□□ -0.8
HOXA1-201ENST00000343060 C20orf27Q9GZN8 174 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 SUDS3Q9H7L9 328 aaPredicted RBP10.05□□□□□ -0.8
HOXA1-201ENST00000343060 ZNF696Q9H7X3 374 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 AGO4Q9HCK5 861 aaKnown RBP10.05□□□□□ -0.8
HOXA1-201ENST00000343060 PCDHB4Q9Y5E5 795 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 MAD1L1Q9Y6D9 718 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 ZNF646O15015 1829 aaPredicted RBP10.05□□□□□ -0.8
HOXA1-201ENST00000343060 FAM189A1O60320 539 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 KLHL2O95198 593 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 WEE2P0C1S8 567 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 TBXAS1P24557 533 aaPredicted RBP10.05□□□□□ -0.8
HOXA1-201ENST00000343060 ERFP50548 548 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 COPAP53621 1224 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 SLC25A3Q00325 362 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 SFSWAPQ12872 951 aaKnown RBP10.05□□□□□ -0.8
HOXA1-201ENST00000343060 APOFQ13790 326 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 TBC1D10BQ4KMP7 808 aaPredicted RBP10.05□□□□□ -0.8
HOXA1-201ENST00000343060 FAM102BQ5T8I3 360 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 SPOPLQ6IQ16 392 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 TMEM270Q6UE05 265 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 KBTBD6Q86V97 674 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 UNC45BQ8IWX7 931 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 THNSL1Q8IYQ7 743 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 RTKN2Q8IZC4 609 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 LRRC43Q8N309 656 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 ACSF2Q96CM8 615 aaPredicted RBP10.05□□□□□ -0.8
HOXA1-201ENST00000343060 FAM84AQ96KN4 292 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 EBF4Q9BQW3 602 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 DHX33Q9H6R0 707 aaKnown RBP10.05□□□□□ -0.8
HOXA1-201ENST00000343060 THAP1Q9NVV9 213 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 CDH22Q9UJ99 828 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 G3BP2Q9UN86 482 aaKnown RBP10.05□□□□□ -0.8
HOXA1-201ENST00000343060 DMTF1Q9Y222 760 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 UBIAD1Q9Y5Z9 338 aa10.05□□□□□ -0.8
HOXA1-201ENST00000343060 TMEM150BA6NC51 233 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 CHADO15335 359 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 EXTL3O43909 919 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 PLA2G6O60733 806 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 MYL4P12829 197 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 CDH5P33151 784 aaPredicted RBP10.04□□□□□ -0.8
HOXA1-201ENST00000343060 CRHR1P34998 444 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 EMP3P54852 163 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 FOLH1Q04609 750 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 NCOA4Q13772 614 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 DPYSL3Q14195 570 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 TLR1Q15399 786 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 TRIP10Q15642 601 aa10.04□□□□□ -0.8
HOXA1-201ENST00000343060 ACBD5Q5T8D3 534 aaPredicted RBP10.04□□□□□ -0.8
HOXA1-201ENST00000343060 KLHDC10Q6PID8 442 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms