RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 SLC8A1P32418 973 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 CLDN10P78369 228 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 CDC42EP1Q00587 391 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 FAM187BQ17R55 369 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 UBXN11Q5T124 520 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 FUKQ8N0W3 1084 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 PRELID2Q8N945 189 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 NSMCE1Q8WV22 266 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 FAM81BQ96LP2 452 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 ADAM33Q9BZ11 813 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 BAIAP2L1Q9UHR4 511 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 HEY1Q9Y5J3 304 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 FAM187AA6NFU0 413 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 PODXLO00592 558 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 CETN2P41208 172 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 PTGIRP43119 386 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 EIF3BP55884 814 aaKnown RBP13.66□□□□□ -0.22
COL18A1-201ENST00000342220 TTC27Q6P3X3 843 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 CPLX4Q7Z7G2 160 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 KCTD6Q8NC69 237 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 RNF34Q969K3 372 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 UVRAGQ9P2Y5 699 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 LRRC37A2A6NM11 1700 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 PTGESO14684 152 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 ITGB1P05556 798 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 CALB1P05937 261 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 CYP2C18P33260 490 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 RPL21P46778 160 aaKnown RBP13.66□□□□□ -0.22
COL18A1-201ENST00000342220 NDUFV1P49821 464 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 OGDHQ02218 1023 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 USP4Q13107 963 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 DHX34Q14147 1143 aaKnown RBP13.66□□□□□ -0.22
COL18A1-201ENST00000342220 LPIN1Q14693 890 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 MON1BQ7L1V2 547 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 SERINC5Q86VE9 423 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 ZC3H18Q86VM9 953 aaKnown RBP13.66□□□□□ -0.22
COL18A1-201ENST00000342220 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.66□□□□□ -0.22
COL18A1-201ENST00000342220 SELENOSQ9BQE4 189 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 NFKBIZQ9BYH8 718 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 PABPC3Q9H361 631 aaKnown RBP13.66□□□□□ -0.22
COL18A1-201ENST00000342220 GRHL1Q9NZI5 618 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 EIF4E1BA6NMX2 242 aaKnown RBP13.66□□□□□ -0.22
COL18A1-201ENST00000342220 GOLGA8MH3BSY2 632 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 DNM1LO00429 736 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 PHF2O75151 1096 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 CD4P01730 458 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 CENPCQ03188 943 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 SLC29A2Q14542 456 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 PPP2R5EQ16537 467 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 DENND2CQ68D51 928 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 CCDC137Q6PK04 289 aaKnown RBP13.66□□□□□ -0.22
COL18A1-201ENST00000342220 AGMOQ6ZNB7 445 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 CACNA2D3Q8IZS8 1091 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 EDEM1Q92611 657 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 KCNK16Q96T55 309 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 MAGEB5Q9BZ81 275 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 SEMA4AQ9H3S1 761 aa13.66□□□□□ -0.22
COL18A1-201ENST00000342220 C5orf60A6NFR6 353 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 ECEL1O95672 775 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 CKBP12277 381 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 MMP8P22894 467 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 GLB1LQ6UWU2 654 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 HOOK3Q86VS8 718 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 RFX6Q8HWS3 928 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 ZNF560Q96MR9 790 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 XPO6Q96QU8 1125 aaKnown RBP13.65□□□□□ -0.22
COL18A1-201ENST00000342220 PLVAPQ9BX97 442 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.65□□□□□ -0.221e-6■■■□□ 18.6
COL18A1-201ENST00000342220 CHST7Q9NS84 486 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 RASAL2Q9UJF2 1139 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 SCINQ9Y6U3 715 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 KPNA6O60684 536 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 CHN1P15882 459 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 DRD4P21917 467 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 IFI35P80217 286 aaPredicted RBP13.65□□□□□ -0.22
COL18A1-201ENST00000342220 SLC5A9Q2M3M2 681 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 DCAF6Q58WW2 860 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 C3orf58Q8NDZ4 430 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 RXFP2Q8WXD0 754 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 STAMBPL1Q96FJ0 436 aa13.65□□□□□ -0.22
COL18A1-201ENST00000342220 MAK16Q9BXY0 300 aaKnown RBP13.65□□□□□ -0.22
COL18A1-201ENST00000342220 ABI2Q9NYB9 513 aaPredicted RBP13.65□□□□□ -0.22
COL18A1-201ENST00000342220 MYBPHLA2RUH7 354 aa13.65□□□□□ -0.23
COL18A1-201ENST00000342220 CYP1A2P05177 515 aa13.65□□□□□ -0.23
COL18A1-201ENST00000342220 NUDT17P0C025 328 aa13.65□□□□□ -0.23
COL18A1-201ENST00000342220 NRLP54845 237 aa13.65□□□□□ -0.23
COL18A1-201ENST00000342220 ADAM17P78536 824 aa13.65□□□□□ -0.23
COL18A1-201ENST00000342220 KRT81Q14533 505 aa13.65□□□□□ -0.23
COL18A1-201ENST00000342220 ARHGEF6Q15052 776 aa13.65□□□□□ -0.23
COL18A1-201ENST00000342220 ERMARDQ5T6L9 678 aa13.65□□□□□ -0.23
COL18A1-201ENST00000342220 C11orf63Q6NUN7 778 aa13.65□□□□□ -0.23
COL18A1-201ENST00000342220 C1orf228Q6PIY5 440 aa13.65□□□□□ -0.23
COL18A1-201ENST00000342220 TRIM72Q6ZMU5 477 aa13.65□□□□□ -0.23
COL18A1-201ENST00000342220 FAM183BPQ6ZVS7 135 aa13.65□□□□□ -0.23
COL18A1-201ENST00000342220 TTC30AQ86WT1 665 aa13.65□□□□□ -0.23
COL18A1-201ENST00000342220 FAM131BQ86XD5 332 aa13.65□□□□□ -0.23
COL18A1-201ENST00000342220 ZNF677Q86XU0 584 aa13.65□□□□□ -0.23
COL18A1-201ENST00000342220 SIX6OS1Q8N1H7 587 aa13.65□□□□□ -0.23
COL18A1-201ENST00000342220 NME8Q8N427 588 aa13.65□□□□□ -0.23
COL18A1-201ENST00000342220 DRAXINQ8NBI3 349 aaPredicted RBP13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms