RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 CFAP97Q9P2B7 532 aa21.34■■□□□ 1.01
SYNE2-201ENST00000341472 FAM92AA1XBS5 289 aa21.33■■□□□ 1.01
SYNE2-201ENST00000341472 PSMA7O14818 248 aa21.33■■□□□ 1.01
SYNE2-201ENST00000341472 SLC16A3O15427 465 aaKnown RBP21.33■■□□□ 1.01
SYNE2-201ENST00000341472 CILPO75339 1184 aa21.33■■□□□ 1.01
SYNE2-201ENST00000341472 EGFP01133 1207 aa21.33■■□□□ 1.01
SYNE2-201ENST00000341472 PMS1P54277 932 aaKnown RBP21.33■■□□□ 1.01
SYNE2-201ENST00000341472 TCERG1LQ5VWI1 586 aa21.33■■□□□ 1.01
SYNE2-201ENST00000341472 DDX42Q86XP3 938 aaKnown RBP eCLIP21.33■■□□□ 1.01
SYNE2-201ENST00000341472 ZC3H3Q8IXZ2 948 aaKnown RBP21.33■■□□□ 1.01
SYNE2-201ENST00000341472 ADGRG2Q8IZP9 1017 aa21.33■■□□□ 1.01
SYNE2-201ENST00000341472 WHAMMQ8TF30 809 aa21.33■■□□□ 1.01
SYNE2-201ENST00000341472 CD101Q93033 1021 aa21.33■■□□□ 1.01
SYNE2-201ENST00000341472 DHTKD1Q96HY7 919 aaPredicted RBP21.33■■□□□ 1.01
SYNE2-201ENST00000341472 HEXIM2Q96MH2 286 aaKnown RBP21.33■■□□□ 1.01
SYNE2-201ENST00000341472 EPC1Q9H2F5 836 aa21.33■■□□□ 1.01
SYNE2-201ENST00000341472 C2orf42Q9NWW7 574 aa21.33■■□□□ 1.01
SYNE2-201ENST00000341472 GMIPQ9P107 970 aa21.33■■□□□ 1.01
SYNE2-201ENST00000341472 ARMCX3Q9UH62 379 aaPredicted RBP21.33■■□□□ 1.01
SYNE2-201ENST00000341472 MAN1B1Q9UKM7 699 aa21.33■■□□□ 1.01
SYNE2-201ENST00000341472 CHURC1-FNTBB4DL54 471 aa21.32■■□□□ 1
SYNE2-201ENST00000341472 K7ESF4 209 aa21.32■■□□□ 1
SYNE2-201ENST00000341472 COCHO43405 550 aa21.32■■□□□ 1
SYNE2-201ENST00000341472 ZDHHC11BP0C7U3 371 aa21.32■■□□□ 1
SYNE2-201ENST00000341472 HOXA6P31267 233 aa21.32■■□□□ 1
SYNE2-201ENST00000341472 FNTBP49356 437 aa21.32■■□□□ 1
SYNE2-201ENST00000341472 FBXO43Q4G163 708 aa21.32■■□□□ 1
SYNE2-201ENST00000341472 DCAF17Q5H9S7 520 aaPredicted RBP21.32■■□□□ 1
SYNE2-201ENST00000341472 NAIF1Q69YI7 327 aaPredicted RBP21.32■■□□□ 1
SYNE2-201ENST00000341472 FILIP1Q7Z7B0 1213 aa21.32■■□□□ 1
SYNE2-201ENST00000341472 DCLK2Q8N568 766 aa21.32■■□□□ 1
SYNE2-201ENST00000341472 TATDN2Q93075 761 aa21.32■■□□□ 1
SYNE2-201ENST00000341472 CIZ1Q9ULV3 898 aaPredicted RBP21.32■■□□□ 1
SYNE2-201ENST00000341472 GADD45BO75293 160 aaPredicted RBP21.31■■□□□ 1
SYNE2-201ENST00000341472 PPP1R2P41236 205 aa21.31■■□□□ 1
SYNE2-201ENST00000341472 TUBP50607 506 aa21.31■■□□□ 1
SYNE2-201ENST00000341472 DMWDQ09019 674 aa21.31■■□□□ 1
SYNE2-201ENST00000341472 ZNF394Q53GI3 561 aa21.31■■□□□ 1
SYNE2-201ENST00000341472 HEATR6Q6AI08 1181 aaKnown RBP21.31■■□□□ 1
SYNE2-201ENST00000341472 LONP2Q86WA8 852 aa21.31■■□□□ 1
SYNE2-201ENST00000341472 SECISBP2LQ93073 1101 aaKnown RBP21.31■■□□□ 1
SYNE2-201ENST00000341472 IPO9Q96P70 1041 aaKnown RBP21.31■■□□□ 1
SYNE2-201ENST00000341472 NACA2Q9H009 215 aa21.31■■□□□ 1
SYNE2-201ENST00000341472 CCSER2Q9H7U1 834 aa21.31■■□□□ 1
SYNE2-201ENST00000341472 METTL14Q9HCE5 456 aaKnown RBP21.31■■□□□ 1
SYNE2-201ENST00000341472 TLR8Q9NR97 1041 aaKnown RBP21.31■■□□□ 1
SYNE2-201ENST00000341472 CISHQ9NSE2 258 aa21.31■■□□□ 1
SYNE2-201ENST00000341472 TBC1D14Q9P2M4 693 aa21.31■■□□□ 1
SYNE2-201ENST00000341472 NCDNQ9UBB6 729 aa21.31■■□□□ 1
SYNE2-201ENST00000341472 RAB23Q9ULC3 237 aa21.31■■□□□ 1
SYNE2-201ENST00000341472 SMG5Q9UPR3 1016 aaKnown RBP21.31■■□□□ 1
SYNE2-201ENST00000341472 MIA3Q5JRA6 1907 aa21.3■■□□□ 1
SYNE2-201ENST00000341472 TICRRQ7Z2Z1 1910 aa21.3■■□□□ 1
SYNE2-201ENST00000341472 E2F8A0AVK6 867 aa21.3■■□□□ 1
SYNE2-201ENST00000341472 TRIM49BA6NDI0 452 aa21.3■■□□□ 1
SYNE2-201ENST00000341472 RNF40O75150 1001 aa21.3■■□□□ 1
SYNE2-201ENST00000341472 CNR2P34972 360 aa21.3■■□□□ 1
SYNE2-201ENST00000341472 CBWD6Q4V339 395 aa21.3■■□□□ 1
SYNE2-201ENST00000341472 CBWD3Q5JTY5 395 aa21.3■■□□□ 1
SYNE2-201ENST00000341472 CBWD5Q5RIA9 395 aa21.3■■□□□ 1
SYNE2-201ENST00000341472 PKN3Q6P5Z2 889 aa21.3■■□□□ 1
SYNE2-201ENST00000341472 CLEC20AQ6ZU45 233 aa21.3■■□□□ 1
SYNE2-201ENST00000341472 JAKMIP2Q96AA8 810 aa21.3■■□□□ 1
SYNE2-201ENST00000341472 DUSP16Q9BY84 665 aa21.3■■□□□ 1
SYNE2-201ENST00000341472 SLC8A2Q9UPR5 921 aa21.3■■□□□ 1
SYNE2-201ENST00000341472 SCML2Q9UQR0 700 aa21.3■■□□□ 1
SYNE2-201ENST00000341472 COQ4Q9Y3A0 265 aa21.3■■□□□ 1
SYNE2-201ENST00000341472 OTOGLQ3ZCN5 2332 aa21.3■■□□□ 1
SYNE2-201ENST00000341472 SCAMP3O14828 347 aaKnown RBP21.29■■□□□ 1
SYNE2-201ENST00000341472 HRO43593 1189 aa21.29■■□□□ 1
SYNE2-201ENST00000341472 ACO1P21399 889 aaKnown RBP21.29■■□□□ 1
SYNE2-201ENST00000341472 DHCR24Q15392 516 aa21.29■■□□□ 1
SYNE2-201ENST00000341472 KIAA2013Q8IYS2 634 aa21.29■■□□□ 1
SYNE2-201ENST00000341472 CCDC26Q8TAB7 109 aa21.29■■□□□ 1
SYNE2-201ENST00000341472 TMEM176AQ96HP8 235 aa21.29■■□□□ 1
SYNE2-201ENST00000341472 CEP63Q96MT8 703 aa21.29■■□□□ 1
SYNE2-201ENST00000341472 FAM124BQ9H5Z6 455 aaPredicted RBP21.29■■□□□ 1
SYNE2-201ENST00000341472 SH3BP1Q9Y3L3 701 aa21.29■■□□□ 1
SYNE2-201ENST00000341472 CFAP54Q96N23 3096 aa21.29■■□□□ 1
SYNE2-201ENST00000341472 COL4A2P08572 1712 aa21.29■■□□□ 1
SYNE2-201ENST00000341472 HHLA1C9JL84 531 aa21.28■■□□□ 1
SYNE2-201ENST00000341472 TLR5O60602 858 aa21.28■■□□□ 1
SYNE2-201ENST00000341472 CD44P16070 742 aaKnown RBP21.28■■□□□ 1
SYNE2-201ENST00000341472 PGFP49763 221 aa21.28■■□□□ 1
SYNE2-201ENST00000341472 SIM2Q14190 667 aaPredicted RBP21.28■■□□□ 1
SYNE2-201ENST00000341472 PPP1R26Q5T8A7 1209 aaPredicted RBP21.28■■□□□ 1
SYNE2-201ENST00000341472 KLHL10Q6JEL2 608 aa21.28■■□□□ 1
SYNE2-201ENST00000341472 RHBDF2Q6PJF5 856 aa21.28■■□□□ 1
SYNE2-201ENST00000341472 PNPLA8Q9NP80 782 aa21.28■■□□□ 1
SYNE2-201ENST00000341472 NUP210Q8TEM1 1887 aaPredicted RBP21.28■■□□□ 1
SYNE2-201ENST00000341472 ZNF292O60281 2723 aa21.28■■□□□ 1
SYNE2-201ENST00000341472 PPP1R3GB7ZBB8 358 aa21.27■■□□□ 1
SYNE2-201ENST00000341472 CYP17A1P05093 508 aa21.27■■□□□ 1
SYNE2-201ENST00000341472 OPRD1P41143 372 aa21.27■■□□□ 1
SYNE2-201ENST00000341472 KIF11P52732 1056 aa21.27■■□□□ 1
SYNE2-201ENST00000341472 RAD23BP54727 409 aa21.27■■□□□ 1
SYNE2-201ENST00000341472 PRR23BQ6ZRT6 265 aa21.27■■□□□ 1
SYNE2-201ENST00000341472 GPRIN1Q7Z2K8 1008 aa21.27■■□□□ 1
SYNE2-201ENST00000341472 WDR5BQ86VZ2 330 aa21.27■■□□□ 1
SYNE2-201ENST00000341472 GPR161Q8N6U8 529 aaKnown RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms