RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 APOL6Q9BWW8 343 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 PIDD1Q9HB75 910 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 SLC17A6Q9P2U8 582 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 FARP1Q9Y4F1 1045 aaPredicted RBP15.01□□□□□ -0.01
CPSF7-201ENST00000340437 ZBED1O96006 694 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 RBL1P28749 1068 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 AQP5P55064 265 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 POU5F2Q8N7G0 328 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 CCDC124Q96CT7 223 aaKnown RBP15□□□□□ -0.01
CPSF7-201ENST00000340437 MMP19Q99542 508 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 TEX13BQ9BXU2 312 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 MAGEB5Q9BZ81 275 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 MAP3K13O43283 966 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 PRPSAP2O60256 369 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 TBX10O75333 385 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 USP1O94782 785 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 CLCN3P51790 818 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 CDK16Q00536 496 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 SLC25A11Q02978 314 aaKnown RBP15□□□□□ -0.01
CPSF7-201ENST00000340437 NDUFAF2Q8N183 169 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 TEX9Q8N6V9 391 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 TTC13Q8NBP0 860 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 SMC1BQ8NDV3 1235 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 AGR3Q8TD06 166 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 ATXN7L3BQ96GX2 97 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 CEP41Q9BYV8 373 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 DHX33Q9H6R0 707 aaKnown RBP15□□□□□ -0.01
CPSF7-201ENST00000340437 AFG3L2Q9Y4W6 797 aa15□□□□□ -0.01
CPSF7-201ENST00000340437 MAFGO15525 162 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 GMPRP36959 345 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 EPHB1P54762 984 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 BST1Q10588 318 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 WASHC2DQ5SRD0 308 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 BBS12Q6ZW61 710 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 ZBTB8OSQ8IWT0 167 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 UNC5BQ8IZJ1 945 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 C12orf29Q8N999 325 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 TSC22D3Q99576 134 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 CYP4F11Q9HBI6 524 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 IL1RAPL1Q9NZN1 696 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 G3BP2Q9UN86 482 aaKnown RBP14.99□□□□□ -0.01
CPSF7-201ENST00000340437 SPATA31C2B4DYI2 1134 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 ATP6V1C1P21283 382 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 LAMTOR4Q0VGL1 99 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 LRRC38Q5VT99 294 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 RSPH3Q86UC2 560 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 C7orf31Q8N865 590 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 RXFP2Q8WXD0 754 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 FAM49BQ9NUQ9 324 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 ZNF214Q9UL59 606 aaPredicted RBP14.99□□□□□ -0.01
CPSF7-201ENST00000340437 STRIP2Q9ULQ0 834 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 LRRC37AA6NMS7 1700 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 SIGLEC16A6NMB1 481 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 HMGCRP04035 888 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 ARL2P36404 184 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 VHLP40337 213 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 CLDN10P78369 228 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 TNFAIP1Q13829 316 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 UBAP2LQ14157 1087 aaKnown RBP14.99□□□□□ -0.01
CPSF7-201ENST00000340437 WDR49Q8IV35 697 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 MICALL2Q8IY33 904 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 VPS11Q9H270 941 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 SPATS2LQ9NUQ6 558 aaKnown RBP14.99□□□□□ -0.01
CPSF7-201ENST00000340437 CORO1CQ9ULV4 474 aaPredicted RBP14.99□□□□□ -0.01
CPSF7-201ENST00000340437 QSER1Q2KHR3 1735 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 DOCK5Q9H7D0 1870 aa14.99□□□□□ -0.01
CPSF7-201ENST00000340437 C3orf70A6NLC5 250 aaPredicted RBP14.98□□□□□ -0.01
CPSF7-201ENST00000340437 OGTO15294 1046 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 NFICP08651 508 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 UBA1P22314 1058 aaKnown RBP14.98□□□□□ -0.01
CPSF7-201ENST00000340437 BCAR1P56945 870 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 DRICH1Q6PGQ1 229 aaPredicted RBP14.98□□□□□ -0.01
CPSF7-201ENST00000340437 NRG4Q8WWG1 115 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 USP6NLQ92738 828 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 APOPT1Q96IL0 206 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 PEBP4Q96S96 227 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 ZCWPW1Q9H0M4 648 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 MTO1Q9Y2Z2 717 aaKnown RBP14.98□□□□□ -0.01
CPSF7-201ENST00000340437 TM9SF1O15321 606 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 LYPLA1O75608 230 aaPredicted RBP14.98□□□□□ -0.01
CPSF7-201ENST00000340437 WFS1O76024 890 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 MICAL2O94851 1124 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 PSMG1O95456 288 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 EIF4BP23588 611 aaKnown RBP14.98□□□□□ -0.01
CPSF7-201ENST00000340437 GRIA1P42261 906 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 C1orf146Q5VVC0 180 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 TRMT10BQ6PF06 316 aaKnown RBP14.98□□□□□ -0.01
CPSF7-201ENST00000340437 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.98□□□□□ -0.018e-6■■■■■ 46.4
CPSF7-201ENST00000340437 TEKT4Q8WW24 435 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 E2F7Q96AV8 911 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 RPF1Q9H9Y2 349 aaKnown RBP14.98□□□□□ -0.01
CPSF7-201ENST00000340437 LOC100653049A0A140TA62 436 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.98□□□□□ -0.01
CPSF7-201ENST00000340437 KRT34O76011 436 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 KRT37O76014 449 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 LSM8O95777 96 aaKnown RBP14.98□□□□□ -0.01
CPSF7-201ENST00000340437 PGK2P07205 417 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 CTC1Q2NKJ3 1217 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 LRRC74BQ6ZQY2 392 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 TEX2Q8IWB9 1127 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms