RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 DUSP4Q13115 394 aa8.22□□□□□ -1.09
TMC1-202ENST00000340019 RAB33AQ14088 237 aa8.22□□□□□ -1.09
TMC1-202ENST00000340019 PIGHQ14442 188 aaPredicted RBP8.22□□□□□ -1.09
TMC1-202ENST00000340019 PTPROQ16827 1216 aa8.22□□□□□ -1.09
TMC1-202ENST00000340019 TPGS2Q68CL5 300 aa8.22□□□□□ -1.09
TMC1-202ENST00000340019 SIX6OS1Q8N1H7 587 aa8.22□□□□□ -1.09
TMC1-202ENST00000340019 AUTS2Q8WXX7 1259 aa8.22□□□□□ -1.09
TMC1-202ENST00000340019 NDRG1Q92597 394 aaKnown RBP8.22□□□□□ -1.09
TMC1-202ENST00000340019 C11orf84Q9BUA3 381 aaPredicted RBP8.22□□□□□ -1.09
TMC1-202ENST00000340019 ULBP1Q9BZM6 244 aa8.22□□□□□ -1.09
TMC1-202ENST00000340019 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.22□□□□□ -1.09
TMC1-202ENST00000340019 ASNSD1Q9NWL6 643 aa8.22□□□□□ -1.09
TMC1-202ENST00000340019 IL37Q9NZH6 218 aa8.22□□□□□ -1.09
TMC1-202ENST00000340019 AFF4Q9UHB7 1163 aaKnown RBP8.22□□□□□ -1.09
TMC1-202ENST00000340019 PCDHA11Q9Y5I1 949 aa8.22□□□□□ -1.09
TMC1-202ENST00000340019 IRAK3Q9Y616 596 aa8.22□□□□□ -1.09
TMC1-202ENST00000340019 SAR1BQ9Y6B6 198 aa8.22□□□□□ -1.09
TMC1-202ENST00000340019 DPYSL4O14531 572 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 GRAP2O75791 330 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 CA3P07451 260 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 GLI1P08151 1106 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 USP17L7P0C7H9 530 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 ATF2P15336 505 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 DNAJB1P25685 340 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 DNAJB2P25686 324 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 CTNNA1P35221 906 aaKnown RBP8.21□□□□□ -1.09
TMC1-202ENST00000340019 GPR15P49685 360 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 RPS6KA1Q15418 735 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 DDR2Q16832 855 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 EFHC1Q5JVL4 640 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 DAB2IPQ5VWQ8 1189 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 ARFGAP1Q8N6T3 406 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 SCAMP5Q8TAC9 235 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.21□□□□□ -1.09
TMC1-202ENST00000340019 SPPL3Q8TCT6 385 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 IRGQQ8WZA9 623 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 SPATA17Q96L03 361 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 OSBPL9Q96SU4 736 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 UBE2OQ9C0C9 1292 aaKnown RBP8.21□□□□□ -1.09
TMC1-202ENST00000340019 ALG13Q9NP73 1137 aaKnown RBP8.21□□□□□ -1.09
TMC1-202ENST00000340019 SSX2IPQ9Y2D8 614 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 SLC27A5Q9Y2P5 690 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 MRFAP1Q9Y605 127 aa8.21□□□□□ -1.09
TMC1-202ENST00000340019 FAM92AA1XBS5 289 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 H0YGN5 161 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 TEX28O15482 410 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 HSF2BPO75031 334 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 URI1O94763 535 aaPredicted RBP8.21□□□□□ -1.1
TMC1-202ENST00000340019 ZBED1O96006 694 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 RB1P06400 928 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 GPD1P21695 349 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 CTNNA2P26232 953 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 PEX5P50542 639 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 ERVFC1P60507 584 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 CREMQ03060 361 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 UBE3AQ05086 875 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 ACAP1Q15027 740 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 CCDC14Q49A88 953 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 SCN4BQ8IWT1 228 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 NUP93Q8N1F7 819 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 RXFP2Q8WXD0 754 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 YBX2Q9Y2T7 364 aaKnown RBP8.21□□□□□ -1.1
TMC1-202ENST00000340019 PCDHA3Q9Y5H8 950 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 YJEFN3A6XGL0 299 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 MIF4GDA9UHW6 222 aaKnown RBP8.21□□□□□ -1.1
TMC1-202ENST00000340019 E7ENQ6 273 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 SART1O43290 800 aaKnown RBP8.21□□□□□ -1.1
TMC1-202ENST00000340019 SRGAP2O75044 1071 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 SOAT2O75908 522 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 SEC24AO95486 1093 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 FYNP06241 537 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 CNPP09543 421 aaKnown RBP8.21□□□□□ -1.1
TMC1-202ENST00000340019 TCP1P17987 556 aaKnown RBP8.21□□□□□ -1.1
TMC1-202ENST00000340019 ATF6P18850 670 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 PSMA2P25787 234 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 RNASE9P60153 205 aaKnown RBP8.21□□□□□ -1.1
TMC1-202ENST00000340019 YWHAZP63104 245 aaKnown RBP8.21□□□□□ -1.1
TMC1-202ENST00000340019 CAMK1Q14012 370 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 MGAT5BQ3V5L5 792 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 DCAF12L1Q5VU92 463 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 HFE2Q6ZVN8 426 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 KRT35Q92764 455 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 NT5C3BQ969T7 300 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 CEP295NLQ96MC4 621 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 SAMD11Q96NU1 681 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 SLC2A13Q96QE2 648 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 TCF25Q9BQ70 676 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 CNPY3Q9BT09 278 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 CDC23Q9UJX2 597 aa8.21□□□□□ -1.1
TMC1-202ENST00000340019 ATG2AQ2TAZ0 1938 aa8.2□□□□□ -1.1
TMC1-202ENST00000340019 CCDC66A2RUB6 948 aa8.2□□□□□ -1.1
TMC1-202ENST00000340019 CES2O00748 559 aa8.2□□□□□ -1.1
TMC1-202ENST00000340019 SPOPO43791 374 aa8.2□□□□□ -1.1
TMC1-202ENST00000340019 LRCH4O75427 683 aa8.2□□□□□ -1.1
TMC1-202ENST00000340019 DAB1O75553 588 aa8.2□□□□□ -1.1
TMC1-202ENST00000340019 PDGFRAP16234 1089 aa8.2□□□□□ -1.1
TMC1-202ENST00000340019 CXCR5P32302 372 aa8.2□□□□□ -1.1
TMC1-202ENST00000340019 BMP8BP34820 402 aa8.2□□□□□ -1.1
TMC1-202ENST00000340019 PBX2P40425 430 aa8.2□□□□□ -1.1
TMC1-202ENST00000340019 PTPN9P43378 593 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms