RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 RTN3O95197 1032 aaPredicted RBP15.51■□□□□ 0.07
CSRP1-201ENST00000340006 ZBED1O96006 694 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 ATF6P18850 670 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 NOP2P46087 812 aaKnown RBP15.51■□□□□ 0.07
CSRP1-201ENST00000340006 PLD1Q13393 1074 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 MTMR3Q13615 1198 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 RAB41Q5JT25 222 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 DNTTIP2Q5QJE6 756 aaKnown RBP15.51■□□□□ 0.07
CSRP1-201ENST00000340006 XYLT1Q86Y38 959 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 ELMOD1Q8N336 334 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 SLC22A17Q8WUG5 538 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 NDRG1Q92597 394 aaKnown RBP15.51■□□□□ 0.07
CSRP1-201ENST00000340006 ZNF512Q96ME7 567 aaPredicted RBP15.51■□□□□ 0.07
CSRP1-201ENST00000340006 SELENOOQ9BVL4 669 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 ULBP1Q9BZM6 244 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 FBXO44Q9H4M3 255 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 PARVAQ9NVD7 372 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 SZT2Q5T011 3432 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 FBXO21O94952 628 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 C1RP00736 705 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 TMEM253P0C7T8 217 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 YWHAQP27348 245 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 GTF2F1P35269 517 aaKnown RBP eCLIP15.51■□□□□ 0.07
CSRP1-201ENST00000340006 SLC6A3Q01959 620 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 PTP4A2Q12974 167 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 DUSP6Q16828 381 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 FAM183BPQ6ZVS7 135 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 DNAJB7Q7Z6W7 309 aaPredicted RBP15.51■□□□□ 0.07
CSRP1-201ENST00000340006 ITIH5Q86UX2 942 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 ZDHHC17Q8IUH5 632 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 CLEC4CQ8WTT0 213 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 CDCA3Q99618 268 aaPredicted RBP15.51■□□□□ 0.07
CSRP1-201ENST00000340006 MRPL47Q9HD33 250 aaKnown RBP15.51■□□□□ 0.07
CSRP1-201ENST00000340006 EHD2Q9NZN4 543 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 LMCD1Q9NZU5 365 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 CTTNBP2NLQ9P2B4 639 aa15.51■□□□□ 0.07
CSRP1-201ENST00000340006 ATG2AQ2TAZ0 1938 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 COL4A4P53420 1690 aaPredicted RBP15.5■□□□□ 0.07
CSRP1-201ENST00000340006 ZNF638Q14966 1978 aaKnown RBP15.5■□□□□ 0.07
CSRP1-201ENST00000340006 RCCD1A6NED2 376 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 PAPSS1O43252 624 aaPredicted RBP15.5■□□□□ 0.07
CSRP1-201ENST00000340006 KRT86O43790 486 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 ABL1P00519 1130 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 CSH1P0DML2 217 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 CSH2P0DML3 217 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 KRT3P12035 628 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 TNNT1P13805 278 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 ARHGAP25P42331 645 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 RPL34P49207 117 aaKnown RBP15.5■□□□□ 0.07
CSRP1-201ENST00000340006 MRPS5P82675 430 aaKnown RBP15.5■□□□□ 0.07
CSRP1-201ENST00000340006 TCEAL5Q5H9L2 206 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 EFHC1Q5JVL4 640 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 FAM102AQ5T9C2 384 aaPredicted RBP15.5■□□□□ 0.07
CSRP1-201ENST00000340006 DNAJC24Q6P3W2 148 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 DCUN1D2Q6PH85 259 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 EP400NLQ6ZTU2 488 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 SLC35G2Q8TBE7 412 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 GOLGA1Q92805 767 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 FAM149B1Q96BN6 582 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 CEP295NLQ96MC4 621 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 GAS2L1Q99501 681 aaPredicted RBP15.5■□□□□ 0.07
CSRP1-201ENST00000340006 LACRTQ9GZZ8 138 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 CNGB3Q9NQW8 809 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 DUSP10Q9Y6W6 482 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 REV3LO60673 3130 aa15.5■□□□□ 0.07
CSRP1-201ENST00000340006 CCL16O15467 120 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 RFPL2O75678 378 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 GRAP2O75791 330 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 USP46P62068 366 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 RBM10P98175 930 aaKnown RBP15.49■□□□□ 0.07
CSRP1-201ENST00000340006 ZNF662Q6ZS27 426 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 HDAC7Q8WUI4 952 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 ARHGEF26Q96DR7 871 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 TRIM10Q9UDY6 481 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 GUCA1BQ9UMX6 200 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 GREB1Q4ZG55 1949 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 CCDC195A0A1B0GUA6 201 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 ZMYND10O75800 440 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 CYP1A2P05177 515 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 MAMLD1Q13495 774 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 PM20D1Q6GTS8 502 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 RTL10Q7L3V2 364 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 MICALL1Q8N3F8 863 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 FBXO32Q969P5 355 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 NUP85Q9BW27 656 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 TSGA10Q9BZW7 698 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 COMMD8Q9NX08 183 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 ASB3Q9Y575 518 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 USP3Q9Y6I4 520 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 SCINQ9Y6U3 715 aa15.49■□□□□ 0.07
CSRP1-201ENST00000340006 PRRC2BQ5JSZ5 2229 aaKnown RBP15.49■□□□□ 0.07
CSRP1-201ENST00000340006 MACROD2A1Z1Q3 448 aa15.48■□□□□ 0.07
CSRP1-201ENST00000340006 SIGLEC16A6NMB1 481 aa15.48■□□□□ 0.07
CSRP1-201ENST00000340006 KIF2AO00139 706 aaPredicted RBP15.48■□□□□ 0.07
CSRP1-201ENST00000340006 CAPN9O14815 690 aa15.48■□□□□ 0.07
CSRP1-201ENST00000340006 GJB6O95452 261 aa15.48■□□□□ 0.07
CSRP1-201ENST00000340006 DAOAP59103 153 aa15.48■□□□□ 0.07
CSRP1-201ENST00000340006 TAF10Q12962 218 aa15.48■□□□□ 0.07
CSRP1-201ENST00000340006 TAF5Q15542 800 aa15.48■□□□□ 0.07
CSRP1-201ENST00000340006 RHOT2Q8IXI1 618 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms