RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 MTMR2Q13614 643 aa5.84□□□□□ -1.47
CSDE1-202ENST00000339438 TRMT5Q32P41 509 aaKnown RBP5.84□□□□□ -1.47
CSDE1-202ENST00000339438 OGFRL1Q5TC84 451 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-202ENST00000339438 POTEHQ6S545 545 aa5.84□□□□□ -1.47
CSDE1-202ENST00000339438 BLIDQ8IZY5 108 aa5.84□□□□□ -1.47
CSDE1-202ENST00000339438 SLC7A5P1Q8MH63 180 aa5.84□□□□□ -1.47
CSDE1-202ENST00000339438 ALLCQ8N6M5 410 aa5.84□□□□□ -1.47
CSDE1-202ENST00000339438 SCAIQ8N9R8 606 aa5.84□□□□□ -1.47
CSDE1-202ENST00000339438 STARD8Q92502 1023 aa5.84□□□□□ -1.47
CSDE1-202ENST00000339438 MAK16Q9BXY0 300 aaKnown RBP5.84□□□□□ -1.47
CSDE1-202ENST00000339438 KLHL4Q9C0H6 718 aa5.84□□□□□ -1.47
CSDE1-202ENST00000339438 JMJD4Q9H9V9 463 aa5.84□□□□□ -1.47
CSDE1-202ENST00000339438 HDAC9Q9UKV0 1011 aa5.84□□□□□ -1.47
CSDE1-202ENST00000339438 RASA4BC9J798 803 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 RASA4O43374 803 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 CSDE1O75534 798 aaKnown RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 LDHAP00338 332 aaKnown RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 GH2P01242 217 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 IL1BP01584 269 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 HLA-DOAP06340 250 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 H2AFZP0C0S5 128 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 C6orf222P0C671 652 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 UBA7P41226 1012 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 BCAP31P51572 246 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 CDK16Q00536 496 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 FKBP3Q00688 224 aaKnown RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 SP2Q02086 613 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 DCAF6Q58WW2 860 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 SPOPLQ6IQ16 392 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 NANOGP8Q6NSW7 305 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 TMEM214Q6NUQ4 689 aaKnown RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 PGM2L1Q6PCE3 622 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 AAGABQ6PD74 315 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 FBXO46Q6PJ61 603 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 H2AFVQ71UI9 128 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 C16orf59Q7L2K0 433 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 CROCCP3Q8IVE0 287 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 VPS50Q96JG6 964 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 CEP63Q96MT8 703 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 BTBD9Q96Q07 612 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 NUDT12Q9BQG2 462 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 TRPC7Q9HCX4 862 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 MAN1C1Q9NR34 630 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 NDE1Q9NXR1 346 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 UVRAGQ9P2Y5 699 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 A0A1W2PPM1 405 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 ITM2AO43736 263 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 OPHN1O60890 802 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 FKBP6O75344 327 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 SULT1C4O75897 302 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 DHRS4L1P0CG22 281 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 THRAP10827 490 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 PTPN2P17706 415 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 ICAM3P32942 547 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 PGM1P36871 562 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 ALDH3B2P48448 385 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 FOLH1Q04609 750 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 PPIDQ08752 370 aaKnown RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 KCNH2Q12809 1159 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 IL23RQ5VWK5 629 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 SH2D5Q6ZV89 423 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 PNMA1Q8ND90 353 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 TANKQ92844 425 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 TTC25Q96NG3 672 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 MRPS26Q9BYN8 205 aaKnown RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 GRIP2Q9C0E4 1043 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 THAP2Q9H0W7 228 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 C1orf21Q9H246 121 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 LIN28AQ9H9Z2 209 aaKnown RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 NCKIPSDQ9NZQ3 722 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 ALG6Q9Y672 507 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 CYP3A7-CYP3A51PA0A087WV96 503 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 HAUS5O94927 633 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 CLPTM1O96005 669 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 TAL1P17542 331 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 CYP3A7P24462 503 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 STIP1P31948 543 aaKnown RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 IREB2P48200 963 aaKnown RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 PRMT2P55345 433 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 MGAT3Q09327 533 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 OVGP1Q12889 678 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 PRKD1Q15139 912 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 C11orf63Q6NUN7 778 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 GJB7Q6PEY0 223 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 KCTD1Q719H9 257 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 ANKRD33Q7Z3H0 272 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 RASSF3Q86WH2 238 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 TMPRSS6Q8IU80 811 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 CPNE9Q8IYJ1 553 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 GIPC3Q8TF64 312 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 PSPC1Q8WXF1 523 aaKnown RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 STMN2Q93045 179 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 GFM2Q969S9 779 aaKnown RBP5.83□□□□□ -1.48
CSDE1-202ENST00000339438 MTMR9Q96QG7 549 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 ZSWIM1Q9BR11 485 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 CCDC106Q9BWC9 280 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 SPZ1Q9BXG8 430 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 OSBPL8Q9BZF1 889 aa5.83□□□□□ -1.48
CSDE1-202ENST00000339438 NMUR2Q9GZQ4 415 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms