RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 CCDC33Q8N5R6 958 aa14.18□□□□□ -0.14
NUDCD3-201ENST00000338427 WHAMMQ8TF30 809 aa14.18□□□□□ -0.14
NUDCD3-201ENST00000338427 TMEM174Q8WUU8 243 aa14.18□□□□□ -0.14
NUDCD3-201ENST00000338427 SEMA4DQ92854 862 aa14.18□□□□□ -0.14
NUDCD3-201ENST00000338427 DLL3Q9NYJ7 618 aa14.18□□□□□ -0.14
NUDCD3-201ENST00000338427 IL37Q9NZH6 218 aa14.18□□□□□ -0.14
NUDCD3-201ENST00000338427 CEP250Q9BV73 2442 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 IKBKBO14920 756 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 CYP17A1P05093 508 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 RETP07949 1114 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 TCF3P15923 654 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 CD58P19256 250 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 PIK3CAP42336 1068 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 SLC5A3P53794 718 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 AMPD2Q01433 879 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 NR1H3Q13133 447 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 PUM1Q14671 1186 aaKnown RBP eCLIP14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 LAIR1Q6GTX8 287 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 ISM2Q6H9L7 571 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 FAM186BQ8IYM0 893 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 NAT16Q8N8M0 369 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 SECISBP2LQ93073 1101 aaKnown RBP14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 TATDN2Q93075 761 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 ZFRQ96KR1 1074 aaKnown RBP14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 CEP295NLQ96MC4 621 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 SLITRK1Q96PX8 696 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 SCAND2PQ9GZW5 306 aaPredicted RBP14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 SMOC1Q9H4F8 434 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 KRT82Q9NSB4 513 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 NUDT5Q9UKK9 219 aa14.17□□□□□ -0.14
NUDCD3-201ENST00000338427 HHLA1C9JL84 531 aa14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 TRIM24O15164 1050 aa14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 ATG13O75143 517 aa14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 RTN3O95197 1032 aaPredicted RBP14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 NFATC1O95644 943 aa14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 MYL1P05976 194 aa14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 IRF1P10914 325 aa14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 HNRNPLP14866 589 aaKnown RBP eCLIP14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 HOXA6P31267 233 aa14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 PPP3CCP48454 512 aa14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 DMC1Q14565 340 aa14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 ZCWPW2Q504Y3 356 aa14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 ZNF394Q53GI3 561 aa14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 HECTD3Q5T447 861 aa14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 ERMP1Q7Z2K6 904 aa14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 GUF1Q8N442 669 aaKnown RBP14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 CCDC47Q96A33 483 aaKnown RBP14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 CYFIP2Q96F07 1278 aa14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 TNIP3Q96KP6 325 aa14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 ARRDC1-AS1Q9H2J1 176 aa14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 DMAP1Q9NPF5 467 aaPredicted RBP14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 SEMA4GQ9NTN9 838 aa14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 OSER1Q9NX31 292 aa14.16□□□□□ -0.14
NUDCD3-201ENST00000338427 MDM4O15151 490 aa14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 ZDHHC11BP0C7U3 371 aa14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 CNR2P34972 360 aa14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 PSMC2P35998 433 aaKnown RBP14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 PRCPP42785 496 aa14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 PMS1P54277 932 aaKnown RBP14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 SF3A2Q15428 464 aaKnown RBP14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 NFIL3Q16649 462 aa14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 LY6G5CQ5SRR4 150 aa14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 BBS7Q8IWZ6 715 aa14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 FMR1NBQ8N0W7 255 aaPredicted RBP14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 USP33Q8TEY7 942 aa14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 GAB3Q8WWW8 586 aa14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 TAF4BQ92750 862 aa14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 SMARCD1Q96GM5 515 aa14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 NMUR1Q9HB89 426 aa14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 CSNK1G1Q9HCP0 422 aa14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 RXFP3Q9NSD7 469 aa14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 EHD2Q9NZN4 543 aa14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 RALGAPA1Q6GYQ0 2036 aa14.15□□□□□ -0.14
NUDCD3-201ENST00000338427 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 MAPK13O15264 365 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 RPP40O75818 363 aaKnown RBP14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 KIF20AO95235 890 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 CCDC192P0DO97 292 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 KRT13P13646 458 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 P4HA1P13674 534 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 PFKLP17858 780 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 TIE1P35590 1138 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 PDE6CP51160 858 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 DGKEP52429 567 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 KDSRQ06136 332 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 FBXO43Q4G163 708 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 ANKRD40Q6AI12 368 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 TMEM92Q6UXU6 159 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 CLEC20AQ6ZU45 233 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 SYT13Q7L8C5 426 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 UNC93AQ86WB7 457 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 TTC30AQ86WT1 665 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 TMEM25Q86YD3 366 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 GPR161Q8N6U8 529 aaKnown RBP14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 ENGASEQ8NFI3 743 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 ERLEC1Q96DZ1 483 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 HNRNPABQ99729 332 aaKnown RBP14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 TPSD1Q9BZJ3 242 aa14.14□□□□□ -0.15
NUDCD3-201ENST00000338427 ATP6V1DQ9Y5K8 247 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms