RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 PASD1Q8IV76 773 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 WDTC1Q8N5D0 677 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 SHKBP1Q8TBC3 707 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 FGF13Q92913 245 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 TCEAL4Q96EI5 215 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 MCRS1Q96EZ8 462 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 RPGRIP1Q96KN7 1286 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 PPP1R13BQ96KQ4 1090 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 SLC4A5Q9BY07 1137 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 SLITRK6Q9H5Y7 841 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 TASP1Q9H6P5 420 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 SYNCQ9H7C4 482 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 CNGB3Q9NQW8 809 aa12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 TLR8Q9NR97 1041 aaKnown RBP12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 SEPT11Q9NVA2 429 aaKnown RBP12.54□□□□□ -0.4
SPTLC1-202ENST00000337841 ZNF840PA6NDX5 716 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 SART1O43290 800 aaKnown RBP12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 MOSPD3O75425 235 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 SERPING1P05155 500 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 USP17L7P0C7H9 530 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 SKILP12757 684 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 LAMP2P13473 410 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 GJA1P17302 382 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 CHRNB2P17787 502 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 PFKLP17858 780 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 CDH5P33151 784 aaPredicted RBP12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 RPL34P49207 117 aaKnown RBP12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 TBX2Q13207 712 aaPredicted RBP12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 SLC5A9Q2M3M2 681 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 PPP1R2P3Q6NXS1 205 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 GPRIN1Q7Z2K8 1008 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 CCDC186Q7Z3E2 898 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 TMEM110Q86TL2 294 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 ERICH1Q86X53 443 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 CNGA4Q8IV77 575 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 ADHFE1Q8IWW8 467 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 SCML4Q8N228 414 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 TDRD5Q8NAT2 981 aaKnown RBP12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 IPO4Q8TEX9 1081 aaKnown RBP12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 SLC20A1Q8WUM9 679 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 ING5Q8WYH8 240 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 IRGQQ8WZA9 623 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 GOLGA1Q92805 767 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 ULBP1Q9BZM6 244 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 HAUS4Q9H6D7 363 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 NCANO14594 1321 aa12.53□□□□□ -0.4
SPTLC1-202ENST00000337841 TRAV19A0A0A6YYK7 116 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 GOLGA6L6A8MZA4 724 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 RALAP11233 206 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 CEBPBP17676 345 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 HDCP19113 662 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 HNRNPH3P31942 346 aaKnown RBP12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 ADKP55263 362 aaKnown RBP12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 CYP4F8P98187 520 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 FMO1Q01740 532 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 ADIGQ0VDE8 80 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 PDCLQ13371 301 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 TDRD12Q587J7 1177 aaKnown RBP12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 TJAP1Q5JTD0 557 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 HECTD3Q5T447 861 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 SNX30Q5VWJ9 437 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 NAA35Q5VZE5 725 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 TXNDC8Q6A555 127 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 TMEM150AQ86TG1 271 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 TADA2BQ86TJ2 420 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 SCUBE3Q8IX30 993 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 NPAS3Q8IXF0 933 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 ZDHHC14Q8IZN3 488 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 MAB21L3Q8N8X9 362 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 C1orf131Q8NDD1 294 aaKnown RBP12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 CPA5Q8WXQ8 436 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 C18orf8Q96DM3 657 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 MYADMQ96S97 322 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 SLC46A2Q9BY10 475 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 GRPEL1Q9HAV7 217 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 TRPC7Q9HCX4 862 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 CLIC5Q9NZA1 410 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 GMIPQ9P107 970 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 EPS15L1Q9UBC2 864 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 NAGPAQ9UK23 515 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 PLXNA3P51805 1871 aa12.52□□□□□ -0.41
SPTLC1-202ENST00000337841 MTCL1Q9Y4B5 1905 aaKnown RBP12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 PIK3R2O00459 728 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 CYP1A1P04798 512 aaPredicted RBP12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 ZDHHC11BP0C7U3 371 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 SP100P23497 879 aaPredicted RBP12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 WEE1P30291 646 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 CDC25BP30305 580 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 AVPR1AP37288 418 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 NSFP46459 744 aaKnown RBP12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 YWHAGP61981 247 aaKnown RBP eCLIP12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 CLEC16AQ2KHT3 1053 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 EFHC1Q5JVL4 640 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 BTBD8Q5XKL5 378 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 OR6B2Q6IFH4 312 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 ZNF571Q7Z3V5 609 aaPredicted RBP12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 ZDHHC17Q8IUH5 632 aa12.51□□□□□ -0.41
SPTLC1-202ENST00000337841 CMTM8Q8IZV2 173 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms