RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CFAP97Q9P2B7 532 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 TBC1D14Q9P2M4 693 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 CPQQ9Y646 472 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 PTPRDP23468 1912 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 LAMA1P25391 3075 aa11.32□□□□□ -0.6
CAPN3-202ENST00000337571 LRRIQ3A6PVS8 624 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-202ENST00000337571 SLC30A4O14863 429 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 IKBKBO14920 756 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 ADH1CP00326 375 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 C4BPAP04003 597 aaKnown RBP11.31□□□□□ -0.6
CAPN3-202ENST00000337571 NR3C1P04150 777 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 ZNF806P0C7X5 589 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 PFKFB1P16118 471 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 HOXC13P31276 330 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 DGKEP52429 567 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 SEC13P55735 322 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 CLDN10P78369 228 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 KRT85P78386 507 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 USP39Q53GS9 565 aaKnown RBP11.31□□□□□ -0.6
CAPN3-202ENST00000337571 HECTD3Q5T447 861 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 BTBD8Q5XKL5 378 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 NAIF1Q69YI7 327 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-202ENST00000337571 SCARA5Q6ZMJ2 495 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 NUDT18Q6ZVK8 323 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 ACOT1Q86TX2 421 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 C11orf74Q86VG3 221 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 CCDC150Q8NCX0 1101 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 TSTD1Q8NFU3 115 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 TMEM174Q8WUU8 243 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 MARVELD3Q96A59 401 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 ZC3H10Q96K80 434 aaKnown RBP11.31□□□□□ -0.6
CAPN3-202ENST00000337571 PNKPQ96T60 521 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 IMPG2Q9BZV3 1241 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 SMYD3Q9H7B4 428 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 DMAP1Q9NPF5 467 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-202ENST00000337571 DMAC2Q9NW81 257 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 COMMD8Q9NX08 183 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 EBF1Q9UH73 591 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 SH3BP1Q9Y3L3 701 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 NME7Q9Y5B8 376 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 PCDHGA5Q9Y5G8 931 aa11.31□□□□□ -0.6
CAPN3-202ENST00000337571 E2F8A0AVK6 867 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-202ENST00000337571 ACTN4O43707 911 aaKnown RBP11.3□□□□□ -0.6
CAPN3-202ENST00000337571 KLRC4O43908 158 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 ALDH1A2O94788 518 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 OAS1P00973 400 aaKnown RBP11.3□□□□□ -0.6
CAPN3-202ENST00000337571 APODP05090 189 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 RPL13P26373 211 aaKnown RBP11.3□□□□□ -0.6
CAPN3-202ENST00000337571 GBP1P32455 592 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 SYKP43405 635 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 RAP1GAPP47736 663 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 CACNA2D1P54289 1103 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 DLG4P78352 724 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 MRPS21P82921 87 aaKnown RBP11.3□□□□□ -0.6
CAPN3-202ENST00000337571 ZXDBP98169 803 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 PKP1Q13835 747 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 DHCR24Q15392 516 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 CCDC6Q16204 474 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 PREPLQ4J6C6 727 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-202ENST00000337571 UNC93AQ86WB7 457 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 TTC30AQ86WT1 665 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 KIAA0895Q8NCT3 520 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 CCDC34Q96HJ3 373 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 GZF1Q9H116 711 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-202ENST00000337571 KCTD10Q9H3F6 313 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 FBXO44Q9H4M3 255 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 POLR3BQ9NW08 1133 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-202ENST00000337571 ATP6V1DQ9Y5K8 247 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 MYH10P35580 1976 aa11.3□□□□□ -0.6
CAPN3-202ENST00000337571 K7EQS6 105 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 SCAMP3O14828 347 aaKnown RBP11.29□□□□□ -0.6
CAPN3-202ENST00000337571 GDF9O60383 454 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 AP1G2O75843 785 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 EPN2O95208 641 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 OLFM2O95897 454 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 KRT13P13646 458 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 OPRD1P41143 372 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 EIF2DP41214 584 aaKnown RBP11.29□□□□□ -0.6
CAPN3-202ENST00000337571 PIK3CAP42336 1068 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 VAMP7P51809 220 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 CREB5Q02930 508 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 GAD2Q05329 585 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 GOLGA8FQ08AF8 430 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 GOLGA8DPQ0D2H9 430 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 SF3A2Q15428 464 aaKnown RBP11.29□□□□□ -0.6
CAPN3-202ENST00000337571 ZACNQ401N2 412 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 PPM1JQ5JR12 505 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 SV2AQ7L0J3 742 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 FAM35AQ86V20 835 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 CRYBG2Q8N1P7 616 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 CCDC33Q8N5R6 958 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 SCAMP5Q8TAC9 235 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 PLEKHO2Q8TD55 490 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 SLC2A14Q8TDB8 520 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 USP33Q8TEY7 942 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 EZH1Q92800 747 aaPredicted RBP11.29□□□□□ -0.6
CAPN3-202ENST00000337571 OTUB2Q96DC9 234 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 SCAND2PQ9GZW5 306 aaPredicted RBP11.29□□□□□ -0.6
CAPN3-202ENST00000337571 POLMQ9NP87 494 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms