RNA–Protein interactions for RNA: ENST00000337304.2

ATF4-201, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-201ENST00000337304 NDRG1Q92597 394 aaKnown RBP27.25■■□□□ 1.95
ATF4-201ENST00000337304 CSNK1G1Q9HCP0 422 aa27.25■■□□□ 1.95
ATF4-201ENST00000337304 TRAPPC3O43617 180 aa27.24■■□□□ 1.95
ATF4-201ENST00000337304 KRT10P13645 584 aa27.24■■□□□ 1.95
ATF4-201ENST00000337304 CDKN2BP42772 138 aa27.24■■□□□ 1.95
ATF4-201ENST00000337304 PTPN9P43378 593 aa27.24■■□□□ 1.95
ATF4-201ENST00000337304 MRPS5P82675 430 aaKnown RBP27.24■■□□□ 1.95
ATF4-201ENST00000337304 TSPY1Q01534 308 aa27.24■■□□□ 1.95
ATF4-201ENST00000337304 FAM172AQ8WUF8 416 aa27.24■■□□□ 1.95
ATF4-201ENST00000337304 FUT8Q9BYC5 575 aa27.24■■□□□ 1.95
ATF4-201ENST00000337304 HHLA1C9JL84 531 aa27.24■■□□□ 1.95
ATF4-201ENST00000337304 FNTAP49354 379 aa27.24■■□□□ 1.95
ATF4-201ENST00000337304 TKTL1P51854 596 aa27.24■■□□□ 1.95
ATF4-201ENST00000337304 ADCY2Q08462 1091 aa27.24■■□□□ 1.95
ATF4-201ENST00000337304 TFDP3Q5H9I0 405 aa27.24■■□□□ 1.95
ATF4-201ENST00000337304 AENQ8WTP8 325 aaKnown RBP27.24■■□□□ 1.95
ATF4-201ENST00000337304 TRIM51Q9BSJ1 452 aa27.24■■□□□ 1.95
ATF4-201ENST00000337304 C11orf84Q9BUA3 381 aaPredicted RBP27.24■■□□□ 1.95
ATF4-201ENST00000337304 UBXN6Q9BZV1 441 aa27.24■■□□□ 1.95
ATF4-201ENST00000337304 NGRNQ9NPE2 291 aaKnown RBP27.24■■□□□ 1.95
ATF4-201ENST00000337304 CHST7Q9NS84 486 aa27.24■■□□□ 1.95
ATF4-201ENST00000337304 ADAM28Q9UKQ2 775 aa27.24■■□□□ 1.95
ATF4-201ENST00000337304 R3HDM2Q9Y2K5 976 aaKnown RBP27.24■■□□□ 1.95
ATF4-201ENST00000337304 hCG_1818297A0A087WSY0 165 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 FAM187AA6NFU0 413 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 TBKBP1A7MCY6 615 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 OAZ2O95190 189 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 BDNFP23560 247 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 MAPRE1Q15691 268 aaKnown RBP27.23■■□□□ 1.95
ATF4-201ENST00000337304 RAB41Q5JT25 222 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.23■■□□□ 1.95
ATF4-201ENST00000337304 GPRIN1Q7Z2K8 1008 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 SIX6OS1Q8N1H7 587 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 CMASQ8NFW8 434 aaPredicted RBP27.23■■□□□ 1.95
ATF4-201ENST00000337304 IFT81Q8WYA0 676 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 DDX23Q9BUQ8 820 aaKnown RBP27.23■■□□□ 1.95
ATF4-201ENST00000337304 MRPL9Q9BYD2 267 aaKnown RBP27.23■■□□□ 1.95
ATF4-201ENST00000337304 DCLK3Q9C098 648 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 ALDH2P05091 517 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 TFE3P19532 575 aaPredicted RBP27.23■■□□□ 1.95
ATF4-201ENST00000337304 KDELR1P24390 212 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 SLC11A1P49279 550 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 BCAR1P56945 870 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 KAZNQ674X7 775 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 CNKSR3Q6P9H4 555 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 JAMLQ86YT9 394 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 ATG4AQ8WYN0 398 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 SEC14L1Q92503 715 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 RUNDC3BQ96NL0 473 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 MARCH5Q9NX47 278 aa27.23■■□□□ 1.95
ATF4-201ENST00000337304 UTP11Q9Y3A2 253 aaKnown RBP27.23■■□□□ 1.95
ATF4-201ENST00000337304 ATP8B1O43520 1251 aa27.22■■□□□ 1.95
ATF4-201ENST00000337304 HSF2BPO75031 334 aa27.22■■□□□ 1.95
ATF4-201ENST00000337304 SASH3O75995 380 aa27.22■■□□□ 1.95
ATF4-201ENST00000337304 KCNJ1P48048 391 aa27.22■■□□□ 1.95
ATF4-201ENST00000337304 HSPH1Q92598 858 aa27.22■■□□□ 1.95
ATF4-201ENST00000337304 CENPIQ92674 756 aaPredicted RBP27.22■■□□□ 1.95
ATF4-201ENST00000337304 ADAM33Q9BZ11 813 aa27.22■■□□□ 1.95
ATF4-201ENST00000337304 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.22■■□□□ 1.95
ATF4-201ENST00000337304 NFU1Q9UMS0 254 aa27.22■■□□□ 1.95
ATF4-201ENST00000337304 KIAA0100Q14667 2235 aaKnown RBP27.22■■□□□ 1.95
ATF4-201ENST00000337304 SYN3O14994 580 aa27.21■■□□□ 1.95
ATF4-201ENST00000337304 PRPSAP2O60256 369 aa27.21■■□□□ 1.95
ATF4-201ENST00000337304 DESP17661 470 aa27.21■■□□□ 1.95
ATF4-201ENST00000337304 HDAC4P56524 1084 aa27.21■■□□□ 1.95
ATF4-201ENST00000337304 IKBKEQ14164 716 aa27.21■■□□□ 1.95
ATF4-201ENST00000337304 TAZQ16635 292 aa27.21■■□□□ 1.95
ATF4-201ENST00000337304 CCDC105Q8IYK2 499 aa27.21■■□□□ 1.95
ATF4-201ENST00000337304 FAM149B1Q96BN6 582 aa27.21■■□□□ 1.95
ATF4-201ENST00000337304 COLEC11Q9BWP8 271 aa27.21■■□□□ 1.95
ATF4-201ENST00000337304 ULBP1Q9BZM6 244 aa27.21■■□□□ 1.95
ATF4-201ENST00000337304 FAN1Q9Y2M0 1017 aa27.21■■□□□ 1.95
ATF4-201ENST00000337304 PATJQ8NI35 1801 aa27.21■■□□□ 1.95
ATF4-201ENST00000337304 FBXO21O94952 628 aa27.21■■□□□ 1.95
ATF4-201ENST00000337304 TJP3O95049 919 aa27.21■■□□□ 1.95
ATF4-201ENST00000337304 SNX1Q13596 522 aa27.21■■□□□ 1.95
ATF4-201ENST00000337304 DDX42Q86XP3 938 aaKnown RBP eCLIP27.21■■□□□ 1.95
ATF4-201ENST00000337304 RAB17Q9H0T7 212 aa27.21■■□□□ 1.95
ATF4-201ENST00000337304 DAB1O75553 588 aa27.2■■□□□ 1.94
ATF4-201ENST00000337304 CD48P09326 243 aa27.2■■□□□ 1.94
ATF4-201ENST00000337304 RFC2P35250 354 aa27.2■■□□□ 1.94
ATF4-201ENST00000337304 MATKP42679 507 aa27.2■■□□□ 1.94
ATF4-201ENST00000337304 EPHB4P54760 987 aa27.2■■□□□ 1.94
ATF4-201ENST00000337304 YWHAZP63104 245 aaKnown RBP27.2■■□□□ 1.94
ATF4-201ENST00000337304 SCYL2Q6P3W7 929 aa27.2■■□□□ 1.94
ATF4-201ENST00000337304 DEFB106AQ8N104 65 aa27.2■■□□□ 1.94
ATF4-201ENST00000337304 KCTD6Q8NC69 237 aa27.2■■□□□ 1.94
ATF4-201ENST00000337304 NCAPGQ9BPX3 1015 aa27.2■■□□□ 1.94
ATF4-201ENST00000337304 ERP44Q9BS26 406 aa27.2■■□□□ 1.94
ATF4-201ENST00000337304 TMEM175Q9BSA9 504 aa27.2■■□□□ 1.94
ATF4-201ENST00000337304 GPR62Q9BZJ7 368 aa27.2■■□□□ 1.94
ATF4-201ENST00000337304 CNGB3Q9NQW8 809 aa27.2■■□□□ 1.94
ATF4-201ENST00000337304 HOMER3Q9NSC5 361 aa27.2■■□□□ 1.94
ATF4-201ENST00000337304 LTBP2Q14767 1821 aa27.2■■□□□ 1.94
ATF4-201ENST00000337304 OR4Q2P0C623 313 aa27.19■■□□□ 1.94
ATF4-201ENST00000337304 DAOAP59103 153 aa27.19■■□□□ 1.94
ATF4-201ENST00000337304 CUL1Q13616 776 aa27.19■■□□□ 1.94
ATF4-201ENST00000337304 CCNG2Q16589 344 aa27.19■■□□□ 1.94
ATF4-201ENST00000337304 VARS2Q5ST30 1063 aaKnown RBP27.19■■□□□ 1.94
ATF4-201ENST00000337304 HDXQ7Z353 690 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms