RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 ROR1Q01973 937 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 MMRN1Q13201 1228 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 NOMO1Q15155 1222 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 RAB6CQ53S08 254 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 SCYL2Q6P3W7 929 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 CPLX4Q7Z7G2 160 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 IFNL1Q8IU54 200 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 SUGP1Q8IWZ8 645 aaKnown RBP17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 SCUBE3Q8IX30 993 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 KHSRPQ92945 711 aaKnown RBP eCLIP17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 RAB6CQ9H0N0 254 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 C10orf88Q9H8K7 445 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 DOCK3Q8IZD9 2030 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 SPTLC1O15269 473 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 KPNA6O60684 536 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 CAPN15O75808 1086 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 PDGFRBP09619 1106 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 FGFR1P11362 822 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 CCDC130P13994 396 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 AKR1A1P14550 325 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 DRD4P21917 467 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 ADORA2BP29275 332 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 HIF1AQ16665 826 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 TAF2Q6P1X5 1199 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 LIMS2Q7Z4I7 341 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 VSIG1Q86XK7 387 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 UNC45BQ8IWX7 931 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 SMG8Q8ND04 991 aaKnown RBP17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 CPT1BQ92523 772 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 RNF157Q96PX1 679 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 LPIN3Q9BQK8 851 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 ZFYVE28Q9HCC9 887 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 NAALADL1Q9UQQ1 740 aa17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.42■□□□□ 0.38
TMEM39B-201ENST00000336294 TRPM7Q96QT4 1865 aa17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 EXOC1LA0A1B0GW35 172 aa17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 HUS1O60921 280 aa17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 GABBR2O75899 941 aa17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 STIP1P31948 543 aaKnown RBP17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 PTPN9P43378 593 aa17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 ACADSBP45954 432 aa17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 ARL4CP56559 192 aa17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 SOX4Q06945 474 aaPredicted RBP17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 PDIA2Q13087 525 aaKnown RBP17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 QPCTQ16769 361 aa17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 TWF2Q6IBS0 349 aaKnown RBP17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 DARS2Q6PI48 645 aaKnown RBP17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 SLC26A9Q7LBE3 791 aa17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 TAX1BP1Q86VP1 789 aa17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 ZBED8Q8IZ13 594 aa17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 NAT8LQ8N9F0 302 aa17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 FAM71DQ8N9W8 422 aa17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 TNIP3Q96KP6 325 aa17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 ZNF317Q96PQ6 595 aaPredicted RBP17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 PRMT1Q99873 361 aaKnown RBP17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 PPCSQ9HAB8 311 aa17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 DDX20Q9UHI6 824 aaKnown RBP17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 ACTL7BQ9Y614 415 aa17.41■□□□□ 0.38
TMEM39B-201ENST00000336294 TMEM120BA0PK00 339 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 M0QZ92 97 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 MDM4O15151 490 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 HCRTO43612 131 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 TGM2P21980 687 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 LMO2P25791 158 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 RPL34P49207 117 aaKnown RBP17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 INHBEP58166 350 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 FASTKD3Q14CZ7 662 aaKnown RBP17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 GKAP1Q5VSY0 366 aaPredicted RBP17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 RGMBQ6NW40 437 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 VSTM1Q6UX27 236 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 NPNTQ6UXI9 565 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 ARCQ7LC44 396 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 FAM228AQ86W67 206 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 ADGRF2Q8IZF7 708 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 CACNA2D3Q8IZS8 1091 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 TOP6BLQ8N6T0 577 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 ZNF784Q8NCA9 323 aaPredicted RBP17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 SNRNP25Q9BV90 132 aaKnown RBP17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 B3GNT5Q9BYG0 378 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 VPS37BQ9H9H4 285 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 GOLGA2P5Q9HBQ8 144 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 EURLQ9NYK6 297 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 ZNF487B1APH4 448 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 APOL1O14791 398 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 DUSP11O75319 330 aaKnown RBP17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 WARSP23381 471 aaKnown RBP17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 NR1H3Q13133 447 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 TDRPQ86YL5 185 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 CCDC13Q8IYE1 715 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 CYP4X1Q8N118 509 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 ARRDC4Q8NCT1 418 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 SEC16BQ96JE7 1060 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 HSFY1Q96LI6 401 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 PCDH18Q9HCL0 1135 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 KCNK9Q9NPC2 374 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 NMRK2Q9NPI5 230 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 GPATCH2LQ9NWQ4 482 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 TBK1Q9UHD2 729 aa17.4■□□□□ 0.38
TMEM39B-201ENST00000336294 TRIP12Q14669 1992 aaPredicted RBP17.39■□□□□ 0.37
TMEM39B-201ENST00000336294 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms