RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 NINJ2Q9NZG7 142 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 HMGXB4Q9UGU5 601 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 LGALS13Q9UHV8 139 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 DNPEPQ9ULA0 475 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 USP18Q9UMW8 372 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 ACTL7BQ9Y614 415 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 PRUNE2Q8WUY3 3088 aa9.38□□□□□ -0.91
TREM1-202ENST00000334475 TRIP12Q14669 1992 aaPredicted RBP9.37□□□□□ -0.91
TREM1-202ENST00000334475 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.37□□□□□ -0.91
TREM1-202ENST00000334475 A0A087WUV0 522 aaPredicted RBP9.37□□□□□ -0.91
TREM1-202ENST00000334475 CFAP69A5D8W1 941 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 GMNCA6NCL1 334 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 C5orf60A6NFR6 353 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 PI4K2BG5E9Z4 385 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 TK2O00142 265 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 PIRO00625 290 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 MCF2LO15068 1137 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 TRAPPC3O43617 180 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 CDH16O75309 829 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 KRT10P13645 584 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 AKR1A1P14550 325 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 TCF4P15884 667 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 MIPP30301 263 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 CHKAP35790 457 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 PTPN9P43378 593 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 ACADSBP45954 432 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 RPL34P49207 117 aaKnown RBP9.37□□□□□ -0.91
TREM1-202ENST00000334475 TAF6P49848 677 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 ARSEP51690 589 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 BCAT1P54687 386 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 FCGRTP55899 365 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 SLC6A3Q01959 620 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 CBLBQ13191 982 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 AUHQ13825 339 aaKnown RBP9.37□□□□□ -0.91
TREM1-202ENST00000334475 RASA2Q15283 850 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 P3H1Q32P28 736 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 ATP13A4Q4VNC1 1196 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 FBXO47Q5MNV8 452 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 KAZNQ674X7 775 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 OR6B2Q6IFH4 312 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 FAM183BPQ6ZVS7 135 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 LIMS2Q7Z4I7 341 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 ANKS1BQ7Z6G8 1248 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 HACE1Q8IYU2 909 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 CRYBG2Q8N1P7 616 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 ARFGAP1Q8N6T3 406 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 MYCBPAPQ8TBZ2 947 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 HTATIP2Q9BUP3 242 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 KLHL11Q9NVR0 708 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 FETUBQ9UGM5 382 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 RSPH14Q9UHP6 348 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 SNX9Q9Y5X1 595 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 SCN10AQ9Y5Y9 1956 aa9.37□□□□□ -0.91
TREM1-202ENST00000334475 E5RJQ4 531 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 MDM4O15151 490 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 PRPSAP2O60256 369 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 CST8O60676 142 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 DUSP11O75319 330 aaKnown RBP9.36□□□□□ -0.91
TREM1-202ENST00000334475 ZNF189O75820 626 aaPredicted RBP9.36□□□□□ -0.91
TREM1-202ENST00000334475 PFKMP08237 780 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 MYL3P08590 195 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 PDGFRAP16234 1089 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 TGM2P21980 687 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 IL1R2P27930 398 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 HOXD10P28358 340 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 LRPAP1P30533 357 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 SDC4P31431 198 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 STIP1P31948 543 aaKnown RBP9.36□□□□□ -0.91
TREM1-202ENST00000334475 BMP8BP34820 402 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 MAGEA4P43358 317 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 MAGEA10P43363 369 aaPredicted RBP9.36□□□□□ -0.91
TREM1-202ENST00000334475 CCT5P48643 541 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 NKX3-2P78367 333 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 OTUD4Q01804 1114 aaKnown RBP9.36□□□□□ -0.91
TREM1-202ENST00000334475 BST2Q10589 180 aaKnown RBP9.36□□□□□ -0.91
TREM1-202ENST00000334475 LLGL1Q15334 1064 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 TRIP13Q15645 432 aaPredicted RBP9.36□□□□□ -0.91
TREM1-202ENST00000334475 CCDC142Q17RM4 750 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 ERMARDQ5T6L9 678 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 RNASEH2BQ5TBB1 312 aaKnown RBP9.36□□□□□ -0.91
TREM1-202ENST00000334475 TXNRD3NBQ6F5E7 133 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 OLFML1Q6UWY5 402 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 C4orf22Q6V702 233 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 PPP1R21Q6ZMI0 780 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 CENPUQ71F23 418 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 YTHDF3Q7Z739 585 aaKnown RBP9.36□□□□□ -0.91
TREM1-202ENST00000334475 TDRPQ86YL5 185 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 RFX6Q8HWS3 928 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 DEFB123Q8N688 67 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 TOP6BLQ8N6T0 577 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 EMC1Q8N766 993 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 KCTD6Q8NC69 237 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 UBA3Q8TBC4 463 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 ACTL9Q8TC94 416 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 ZNF473Q8WTR7 871 aaKnown RBP9.36□□□□□ -0.91
TREM1-202ENST00000334475 SLC35F5Q8WV83 523 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 DNAJB3Q8WWF6 145 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 RXFP2Q8WXD0 754 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 TNIP3Q96KP6 325 aa9.36□□□□□ -0.91
TREM1-202ENST00000334475 HSFY1Q96LI6 401 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms