RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 TFB1MQ8WVM0 346 aaKnown RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 SH3KBP1Q96B97 665 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 COX4I2Q96KJ9 171 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 CLK4Q9HAZ1 481 aaKnown RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 NGRNQ9NPE2 291 aaKnown RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 FEM1BQ9UK73 627 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 H0YIN7 160 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 TEX46H3BTG2 121 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 ABHD2P08910 425 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 PDHBP11177 359 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 GARTP22102 1010 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 ACAP2Q15057 778 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 ITFG2Q969R8 447 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 GDF3Q9NR23 364 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 RAPGEFL1Q9UHV5 662 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 AAR2Q9Y312 384 aaKnown RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 BICRAQ9NZM4 1560 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 LDLRP01130 860 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 RPS8P62241 208 aaKnown RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 C3orf62Q6ZUJ4 267 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 ARCQ7LC44 396 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 GPIHBP1Q8IV16 184 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 ARID3BQ8IVW6 561 aaPredicted RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 EXD1Q8NHP7 514 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 CLHC1Q8NHS4 586 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 TMCO6Q96DC7 493 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 GDAQ9Y2T3 454 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 PCDHB2Q9Y5E7 798 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 UMODL1Q5DID0 1318 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 ARAP3Q8WWN8 1544 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 EYA4O95677 639 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 PRIM2P49643 509 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 PSMC5P62195 406 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 MTMR1Q13613 665 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 TBCELQ5QJ74 424 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 PADI6Q6TGC4 694 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 PNPLA7Q6ZV29 1317 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 TMEM179Q6ZVK1 233 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 RNFT2Q96EX2 444 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 LRMDAQ9H2I8 198 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 ADPRHL2Q9NX46 363 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 SPDYAQ5MJ70 313 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 FASTKD5Q7L8L6 764 aaKnown RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 KRT78Q8N1N4 520 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 SDR42E1Q8WUS8 393 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 CASKIN2Q8WXE0 1202 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 ZNF594Q96JF6 807 aaPredicted RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 RIBC2Q9H4K1 309 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 TCF7L2Q9NQB0 619 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 STOX2Q9P2F5 926 aaPredicted RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 GINS2Q9Y248 185 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 PPP2R1BP30154 601 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 GRK3P35626 688 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 CHI3L1P36222 383 aaPredicted RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 MAPKAPK2P49137 400 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 PTGES3Q15185 160 aaKnown RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 SLC15A2Q16348 729 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 RC3H1Q5TC82 1133 aaKnown RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 MRNIPQ6NTE8 343 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 DNAJB7Q7Z6W7 309 aaPredicted RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 HSPBP1Q9NZL4 362 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 AFF2P51816 1311 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 ADSSP30520 456 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 AKT1P31749 480 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 CAPGP40121 348 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 RBM46Q8TBY0 533 aaKnown RBP5.69□□□□□ -1.5
PTPRB-202ENST00000334414 UBASH3BQ8TF42 649 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 C18orf8Q96DM3 657 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 NARS2Q96I59 477 aaKnown RBP5.69□□□□□ -1.5
PTPRB-202ENST00000334414 SLC39A8Q9C0K1 460 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 TMEM8AQ9HCN3 771 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 A0A087X1B8 175 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 NEMP1O14524 444 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 GYPCP04921 128 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 PTENP60484 403 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 STK4Q13043 487 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 ARID5BQ14865 1188 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 ZDHHC13Q8IUH4 622 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 CACTIN-AS1Q8N1I8 211 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 DAGLBQ8NCG7 672 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 RDM1Q8NG50 284 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 URGCPQ8TCY9 931 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 PCIF1Q9H4Z3 704 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 JMJD4Q9H9V9 463 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 TMEM216Q9P0N5 145 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 EMSYQ7Z589 1322 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 PEX1O43933 1283 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 NPTXRO95502 500 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 SP100P23497 879 aaPredicted RBP5.69□□□□□ -1.5
PTPRB-202ENST00000334414 YWHABP31946 246 aaKnown RBP5.69□□□□□ -1.5
PTPRB-202ENST00000334414 TNK2Q07912 1038 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 NFX1Q12986 1120 aaKnown RBP5.69□□□□□ -1.5
PTPRB-202ENST00000334414 GRTP1Q5TC63 336 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 CAPSLQ8WWF8 208 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 ASIC4Q96FT7 647 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 PLAGL2Q9UPG8 496 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 SSNA1O43805 119 aa5.69□□□□□ -1.5
PTPRB-202ENST00000334414 EXTL3O43909 919 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms