RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 MAGEA11P43364 429 aa17.38■□□□□ 0.37
SHOX-201ENST00000334060 RPL34P49207 117 aaKnown RBP17.38■□□□□ 0.37
SHOX-201ENST00000334060 OGDHQ02218 1023 aa17.38■□□□□ 0.37
SHOX-201ENST00000334060 PLD1Q13393 1074 aa17.38■□□□□ 0.37
SHOX-201ENST00000334060 OR6B2Q6IFH4 312 aa17.38■□□□□ 0.37
SHOX-201ENST00000334060 TMC5Q6UXY8 1006 aa17.38■□□□□ 0.37
SHOX-201ENST00000334060 TMEM150AQ86TG1 271 aa17.38■□□□□ 0.37
SHOX-201ENST00000334060 TMEM110Q86TL2 294 aa17.38■□□□□ 0.37
SHOX-201ENST00000334060 GPR65Q8IYL9 337 aa17.38■□□□□ 0.37
SHOX-201ENST00000334060 CCDC170Q8IYT3 715 aa17.38■□□□□ 0.37
SHOX-201ENST00000334060 C8orf48Q96LL4 319 aa17.38■□□□□ 0.37
SHOX-201ENST00000334060 ABCB6Q9NP58 842 aa17.38■□□□□ 0.37
SHOX-201ENST00000334060 CALCOCO1Q9P1Z2 691 aa17.38■□□□□ 0.37
SHOX-201ENST00000334060 ZNF638Q14966 1978 aaKnown RBP17.37■□□□□ 0.37
SHOX-201ENST00000334060 FYNP06241 537 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 CYLC1P35663 651 aaPredicted RBP17.37■□□□□ 0.37
SHOX-201ENST00000334060 RNASE9P60153 205 aaKnown RBP17.37■□□□□ 0.37
SHOX-201ENST00000334060 STILQ15468 1287 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 STXBP5Q5T5C0 1151 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 VSTM1Q6UX27 236 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 SCD5Q86SK9 330 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 CCDC112Q8NEF3 446 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 ZNF707Q96C28 371 aaPredicted RBP17.37■□□□□ 0.37
SHOX-201ENST00000334060 CDX2Q99626 313 aaPredicted RBP17.37■□□□□ 0.37
SHOX-201ENST00000334060 METTL5Q9NRN9 209 aaKnown RBP17.37■□□□□ 0.37
SHOX-201ENST00000334060 GMIPQ9P107 970 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 SSX2IPQ9Y2D8 614 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 PPP2R2CQ9Y2T4 447 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 PAXBP1Q9Y5B6 917 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 TBX10O75333 385 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 GZMAP12544 262 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 ELF1P32519 619 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 FLT3P36888 993 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 SH3PXD2AQ5TCZ1 1133 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 PPM1EQ8WY54 764 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 EDEM1Q92611 657 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 TCEAL4Q96EI5 215 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 LMAN2LQ9H0V9 348 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 NSUN3Q9H649 340 aaKnown RBP17.37■□□□□ 0.37
SHOX-201ENST00000334060 LZTFL1Q9NQ48 299 aa17.37■□□□□ 0.37
SHOX-201ENST00000334060 CNOT8Q9UFF9 292 aaKnown RBP17.37■□□□□ 0.37
SHOX-201ENST00000334060 NOTCH4Q99466 2003 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 MTCL1Q9Y4B5 1905 aaKnown RBP17.36■□□□□ 0.37
SHOX-201ENST00000334060 BUB1O43683 1085 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 GABRB2P47870 512 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 ZNF252P-AS1Q0IIN9 211 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 CLUL1Q15846 466 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 SLC5A9Q2M3M2 681 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 TRIM72Q6ZMU5 477 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 EP400NLQ6ZTU2 488 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 DENND5BQ6ZUT9 1274 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 VPS36Q86VN1 386 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 REXO1L1PQ8IX06 675 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 KCTD13Q8WZ19 329 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 C18orf8Q96DM3 657 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 LRRC3Q9BY71 257 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 OXCT2Q9BYC2 517 aaPredicted RBP17.36■□□□□ 0.37
SHOX-201ENST00000334060 SYNCQ9H7C4 482 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 LRRC4Q9HBW1 653 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 CLEC1BQ9P126 229 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 STK39Q9UEW8 545 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 HYOU1Q9Y4L1 999 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 USP3Q9Y6I4 520 aa17.36■□□□□ 0.37
SHOX-201ENST00000334060 C2orf16Q68DN1 1984 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 A0A1W2PQH9 124 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 MDM4O15151 490 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 TBX18O95935 607 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 LTBRP36941 435 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 ATXN1P54253 815 aaKnown RBP17.35■□□□□ 0.37
SHOX-201ENST00000334060 DAOAP59103 153 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 CREMQ03060 361 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 TAF10Q12962 218 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 FAM102AQ5T9C2 384 aaPredicted RBP17.35■□□□□ 0.37
SHOX-201ENST00000334060 SYPL2Q5VXT5 272 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 DNAJB7Q7Z6W7 309 aaPredicted RBP17.35■□□□□ 0.37
SHOX-201ENST00000334060 TMC8Q8IU68 726 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 NUP93Q8N1F7 819 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 IL21Q9HBE4 155 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 DNMT3BQ9UBC3 853 aaKnown RBP17.35■□□□□ 0.37
SHOX-201ENST00000334060 CEP83Q9Y592 693 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 TRIM66O15016 1216 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 ZMYND10O75800 440 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 H2AFZP0C0S5 128 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 ANXA13P27216 316 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 MAMLD1Q13495 774 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 SYCE2Q6PIF2 218 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 H2AFVQ71UI9 128 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 GAREM2Q75VX8 874 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 FMNL3Q8IVF7 1028 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 DEFB123Q8N688 67 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 ADAM32Q8TC27 787 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 C2orf15Q8WU43 125 aaKnown RBP17.35■□□□□ 0.37
SHOX-201ENST00000334060 MCRS1Q96EZ8 462 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 MCEEQ96PE7 176 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 NAALADL1Q9UQQ1 740 aa17.35■□□□□ 0.37
SHOX-201ENST00000334060 ATP8B3O60423 1300 aa17.34■□□□□ 0.37
SHOX-201ENST00000334060 CCDC195A0A1B0GUA6 201 aa17.34■□□□□ 0.37
SHOX-201ENST00000334060 MACROD2A1Z1Q3 448 aa17.34■□□□□ 0.37
SHOX-201ENST00000334060 ZBED1O96006 694 aa17.34■□□□□ 0.37
SHOX-201ENST00000334060 TCF4P15884 667 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms