RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 FOXN3O00409 490 aaPredicted RBP10.31□□□□□ -0.76
SYN3-201ENST00000332840 ZNF263O14978 683 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 PJA2O43164 708 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 VNN2O95498 520 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 CSH1P0DML2 217 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 CSH2P0DML3 217 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 CEBPBP17676 345 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 ARHGAP25P42331 645 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 PSEN1P49768 467 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 CLCN5P51795 746 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 GNG11P61952 73 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 CYP27A1Q02318 531 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 GCNT1Q02742 428 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 PTK2Q05397 1052 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 KIF5AQ12840 1032 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 PDAP1Q13442 181 aaKnown RBP10.31□□□□□ -0.76
SYN3-201ENST00000332840 SGSM1Q2NKQ1 1148 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 CCDC122Q5T0U0 273 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 SMYD5Q6GMV2 418 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 PARM1Q6UWI2 310 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 VSTM1Q6UX27 236 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 ASCL5Q7RTU5 278 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 ZNF571Q7Z3V5 609 aaPredicted RBP10.31□□□□□ -0.76
SYN3-201ENST00000332840 DNAJB7Q7Z6W7 309 aaPredicted RBP10.31□□□□□ -0.76
SYN3-201ENST00000332840 GPIHBP1Q8IV16 184 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 DEPDC1BQ8WUY9 529 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 KBTBD7Q8WVZ9 684 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 ING5Q8WYH8 240 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 SHC3Q92529 594 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 FGF14Q92915 247 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 MCRS1Q96EZ8 462 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 TNIP3Q96KP6 325 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 SYT15Q9BQS2 421 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 XYLT2Q9H1B5 865 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 IRF2BPLQ9H1B7 796 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 CRISPLD1Q9H336 500 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 TRPV4Q9HBA0 871 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 ZFP14Q9HCL3 533 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 DNAI1Q9UI46 699 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 SLC27A5Q9Y2P5 690 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 CACNA1BQ00975 2339 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 CITO14578 2027 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 MIA3Q5JRA6 1907 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 ATP8B3O60423 1300 aa10.31□□□□□ -0.76
SYN3-201ENST00000332840 ANK1P16157 1881 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 FANCMQ8IYD8 2048 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 LRRN2O75325 713 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 VNN1O95497 513 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 ATF6P18850 670 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 TNFAIP3P21580 790 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 TBXAS1P24557 533 aaPredicted RBP10.3□□□□□ -0.76
SYN3-201ENST00000332840 ACAT1P24752 427 aaKnown RBP10.3□□□□□ -0.76
SYN3-201ENST00000332840 DDX6P26196 483 aaKnown RBP eCLIP10.3□□□□□ -0.76
SYN3-201ENST00000332840 WEE1P30291 646 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 CASQ1P31415 396 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 GNL1P36915 607 aaPredicted RBP10.3□□□□□ -0.76
SYN3-201ENST00000332840 MYL6P60660 151 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 FAM171BQ6P995 826 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 LRRTM3Q86VH5 581 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 TMC8Q8IU68 726 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 FAM71AQ8IYT1 594 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 SIX5Q8N196 739 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 TTC39CQ8N584 583 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 OR6B3Q8NGW1 331 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 SHKBP1Q8TBC3 707 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 MYCBPAPQ8TBZ2 947 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 RSAD2Q8WXG1 361 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 DNASE1L2Q92874 299 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 TATDN2Q93075 761 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 FAXDC2Q96IV6 333 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 FAM84AQ96KN4 292 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 KREMEN1Q96MU8 473 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 ASB16Q96NS5 453 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 PKMYT1Q99640 499 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 PI4K2AQ9BTU6 479 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 ELOVL4Q9GZR5 314 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 ATXN3LQ9H3M9 355 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 ARHGEF3Q9NR81 526 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 ADAMTS1Q9UHI8 967 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 GTF3C4Q9UKN8 822 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 GUCA1BQ9UMX6 200 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 SPTBN2O15020 2390 aa10.3□□□□□ -0.76
SYN3-201ENST00000332840 A0A087X0T9 212 aa10.29□□□□□ -0.76
SYN3-201ENST00000332840 A0A0U1RQJ8 604 aa10.29□□□□□ -0.76
SYN3-201ENST00000332840 A0A1W2PRU2 124 aa10.29□□□□□ -0.76
SYN3-201ENST00000332840 A8MXQ7 604 aa10.29□□□□□ -0.76
SYN3-201ENST00000332840 TRIM66O15016 1216 aa10.29□□□□□ -0.76
SYN3-201ENST00000332840 ASS1P00966 412 aaKnown RBP10.29□□□□□ -0.76
SYN3-201ENST00000332840 CST3P01034 146 aaPredicted RBP10.29□□□□□ -0.76
SYN3-201ENST00000332840 CFHP08603 1231 aa10.29□□□□□ -0.76
SYN3-201ENST00000332840 FAM228BP0C875 321 aa10.29□□□□□ -0.76
SYN3-201ENST00000332840 PNMA6AP0CW24 399 aaPredicted RBP10.29□□□□□ -0.76
SYN3-201ENST00000332840 GABRR2P28476 465 aa10.29□□□□□ -0.76
SYN3-201ENST00000332840 USP8P40818 1118 aa10.29□□□□□ -0.76
SYN3-201ENST00000332840 CCR2P41597 374 aa10.29□□□□□ -0.76
SYN3-201ENST00000332840 PDE6CP51160 858 aa10.29□□□□□ -0.76
SYN3-201ENST00000332840 TERF1P54274 439 aa10.29□□□□□ -0.76
SYN3-201ENST00000332840 BPIFB4P59827 614 aa10.29□□□□□ -0.76
SYN3-201ENST00000332840 PRKCQQ04759 706 aa10.29□□□□□ -0.76
SYN3-201ENST00000332840 GFPT1Q06210 699 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms