RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 BBS12Q6ZW61 710 aa18.98■□□□□ 0.63
LYSMD4-201ENST00000332728 PALM2Q8IXS6 379 aa18.98■□□□□ 0.63
LYSMD4-201ENST00000332728 CCDC77Q9BR77 488 aa18.98■□□□□ 0.63
LYSMD4-201ENST00000332728 SNRNP25Q9BV90 132 aaKnown RBP18.98■□□□□ 0.63
LYSMD4-201ENST00000332728 ROPN1BQ9BZX4 212 aaPredicted RBP18.98■□□□□ 0.63
LYSMD4-201ENST00000332728 ROPN1Q9HAT0 212 aaPredicted RBP18.98■□□□□ 0.63
LYSMD4-201ENST00000332728 HESX1Q9UBX0 185 aa18.98■□□□□ 0.63
LYSMD4-201ENST00000332728 PPME1Q9Y570 386 aa18.98■□□□□ 0.63
LYSMD4-201ENST00000332728 CDH16O75309 829 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 YWHAGP61981 247 aaKnown RBP eCLIP18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 CAV1Q03135 178 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 LMNB2Q03252 620 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 FAM47CQ5HY64 1035 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 MFSD5Q6N075 450 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 CENPUQ71F23 418 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 NIPA2Q8N8Q9 360 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 STMN4Q9H169 189 aaPredicted RBP18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 TRABDQ9H4I3 376 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 GRID1Q9ULK0 1009 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 STRNO43815 780 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 ITGAVP06756 1048 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 TKTP29401 623 aaKnown RBP18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 SDC4P31431 198 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 GRM5P41594 1212 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 WDR4P57081 412 aaKnown RBP18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 ROR1Q01973 937 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 GBE1Q04446 702 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 MFSD10Q14728 455 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 C9orf57Q5W0N0 161 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 LCLAT1Q6UWP7 414 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 FAF2Q96CS3 445 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 SNX27Q96L92 541 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 PCDH9Q9HC56 1237 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 ETNK2Q9NVF9 386 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 NKIRAS1Q9NYS0 192 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 PLXNB2O15031 1838 aa18.97■□□□□ 0.63
LYSMD4-201ENST00000332728 SMIM28A0A1B0GU29 152 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 BEST1O76090 585 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 CA4P22748 312 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 ELK3P41970 407 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 CCDC185Q8N715 623 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 HASPINQ8TF76 798 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 NKD2Q969F2 451 aaPredicted RBP18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 CNPY3Q9BT09 278 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 NFKBIZQ9BYH8 718 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 MAF1Q9H063 256 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 TRIM33Q9UPN9 1127 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 IQCA1LA6NCM1 817 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 APRTP07741 180 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 GNL1P36915 607 aaPredicted RBP18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 TNFAIP8L3Q5GJ75 292 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 OLFML1Q6UWY5 402 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 C2orf69Q8N8R5 385 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 BBOF1Q8ND07 529 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 PCDH19Q8TAB3 1148 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 KHSRPQ92945 711 aaKnown RBP eCLIP18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 TMEM109Q9BVC6 243 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 C2CD2Q9Y426 696 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 C6orf222P0C671 652 aaPredicted RBP18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 KRT4P19013 534 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 ATICP31939 592 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 GRIA1P42261 906 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 NUMBP49757 651 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 SLC1A5Q15758 541 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 ANKRD20A8PQ5CZ79 823 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 NOTUMQ6P988 496 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 TP53INP2Q8IXH6 220 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 KIF2BQ8N4N8 673 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 CYP3A43Q9HB55 503 aa18.96■□□□□ 0.63
LYSMD4-201ENST00000332728 PGK1P00558 417 aa18.95■□□□□ 0.62
LYSMD4-201ENST00000332728 IL4RP24394 825 aa18.95■□□□□ 0.62
LYSMD4-201ENST00000332728 HDAC4P56524 1084 aa18.95■□□□□ 0.62
LYSMD4-201ENST00000332728 BCAR1P56945 870 aa18.95■□□□□ 0.62
LYSMD4-201ENST00000332728 CRADDP78560 199 aa18.95■□□□□ 0.62
LYSMD4-201ENST00000332728 NME3Q13232 169 aa18.95■□□□□ 0.62
LYSMD4-201ENST00000332728 MORF4L2Q15014 288 aa18.95■□□□□ 0.62
LYSMD4-201ENST00000332728 SNX17Q15036 470 aa18.95■□□□□ 0.62
LYSMD4-201ENST00000332728 TAF1CQ15572 869 aaPredicted RBP18.95■□□□□ 0.62
LYSMD4-201ENST00000332728 CTAGE3PQ8IX95 158 aa18.95■□□□□ 0.62
LYSMD4-201ENST00000332728 BEST2Q8NFU1 509 aa18.95■□□□□ 0.62
LYSMD4-201ENST00000332728 CMASQ8NFW8 434 aaPredicted RBP18.95■□□□□ 0.62
LYSMD4-201ENST00000332728 PARK7Q99497 189 aaKnown RBP18.95■□□□□ 0.62
LYSMD4-201ENST00000332728 RHOBTB2Q9BYZ6 727 aa18.95■□□□□ 0.62
LYSMD4-201ENST00000332728 DARSP14868 501 aaKnown RBP18.95■□□□□ 0.62
LYSMD4-201ENST00000332728 COPS2P61201 443 aa18.95■□□□□ 0.62
LYSMD4-201ENST00000332728 POLNQ7Z5Q5 900 aa18.95■□□□□ 0.62
LYSMD4-201ENST00000332728 MAML1Q92585 1016 aa18.95■□□□□ 0.62
LYSMD4-201ENST00000332728 SEPT10Q9P0V9 454 aa18.95■□□□□ 0.62
LYSMD4-201ENST00000332728 AMPD1P23109 780 aa18.94■□□□□ 0.62
LYSMD4-201ENST00000332728 SCTRP47872 440 aa18.94■□□□□ 0.62
LYSMD4-201ENST00000332728 INCA1Q0VD86 236 aa18.94■□□□□ 0.62
LYSMD4-201ENST00000332728 IFRD2Q12894 506 aaPredicted RBP18.94■□□□□ 0.62
LYSMD4-201ENST00000332728 STAT4Q14765 748 aa18.94■□□□□ 0.62
LYSMD4-201ENST00000332728 FBXO47Q5MNV8 452 aa18.94■□□□□ 0.62
LYSMD4-201ENST00000332728 PRPF39Q86UA1 669 aaKnown RBP18.94■□□□□ 0.62
LYSMD4-201ENST00000332728 PPIL6Q8IXY8 311 aa18.94■□□□□ 0.62
LYSMD4-201ENST00000332728 AGGF1Q8N302 714 aaeCLIP18.94■□□□□ 0.62
LYSMD4-201ENST00000332728 PQLC3Q8N755 202 aa18.94■□□□□ 0.62
LYSMD4-201ENST00000332728 PLD5Q8N7P1 536 aa18.94■□□□□ 0.62
LYSMD4-201ENST00000332728 KBTBD7Q8WVZ9 684 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms