RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 HPCAP84074 193 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 FBXO47Q5MNV8 452 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 C11orf63Q6NUN7 778 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 KIAA1683Q9H0B3 1180 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 NMRK1Q9NWW6 199 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 SCN3BQ9NY72 215 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 PPP2R3BQ9Y5P8 575 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 THRAP10827 490 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 SOX11P35716 441 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 NUDT2P50583 147 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 RUNX1T1Q06455 604 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 SLC47A2Q86VL8 602 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 PCSK9Q8NBP7 692 aaKnown RBP17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 PHF21AQ96BD5 680 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 EFCAB1Q9HAE3 211 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 CHST12Q9NRB3 414 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 ZNF229Q9UJW7 825 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 DIP2AQ14689 1571 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 NCAM2O15394 837 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 H2AFYO75367 372 aaKnown RBP17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 NBPF12Q5TAG4 269 aaPredicted RBP17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 EMC1Q8N766 993 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 SLC20A1Q8WUM9 679 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 TMEM121Q9BTD3 319 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 SPATC1LQ9H0A9 340 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 TRPM5Q9NZQ8 1165 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 USP32Q8NFA0 1604 aa17.14■□□□□ 0.33
NSMCE3-201ENST00000332303 SKAP2O75563 359 aaPredicted RBP17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 PLD3Q8IV08 490 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 SPIRE2Q8WWL2 714 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 PAFAH2Q99487 392 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 THUMPD3Q9BV44 507 aaKnown RBP17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 EIF3LQ9Y262 564 aaKnown RBP17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 POLR1AO95602 1720 aaPredicted RBP17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 FRMPD1Q5SYB0 1578 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 H2AFXP16104 143 aaPredicted RBP17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 BST2Q10589 180 aaKnown RBP17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 HORMAD1Q86X24 394 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 FAM9CQ8IZT9 166 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 BHMTQ93088 406 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 H2AFY2Q9P0M6 372 aaPredicted RBP17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 ACOT9Q9Y305 439 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 GRK2P25098 689 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 SHMT1P34896 483 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 MRPS35P82673 323 aaKnown RBP17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 B4GALNT2Q8NHY0 566 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 UCMAQ8WVF2 138 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 MAGEB18Q96M61 343 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 TBCBQ99426 244 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 SLC40A1Q9NP59 571 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 ABCA9Q8IUA7 1624 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 DAB1O75553 588 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 S100A5P33763 92 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 PSMC6P62333 389 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 LAMTOR4Q0VGL1 99 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 CTXN3Q4LDR2 81 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 CACHD1Q5VU97 1274 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 ADCK1Q86TW2 530 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 KIAA0895Q8NCT3 520 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 PAWRQ96IZ0 340 aaKnown RBP17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 UBXN6Q9BZV1 441 aa17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 ASCC2Q9H1I8 757 aaPredicted RBP17.13■□□□□ 0.33
NSMCE3-201ENST00000332303 TCRBV5S4A2TA0A5A2 114 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 NKRFO15226 690 aaKnown RBP eCLIP17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 OXCT1P55809 520 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 ELAVL2Q12926 359 aaKnown RBP17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 TMBIM4Q9HC24 238 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 PCDH9Q9HC56 1237 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 KRT87PA6NCN2 255 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 ALBP02768 609 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 RBP1P09455 135 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 MZF1P28698 734 aaPredicted RBP17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 VHLP40337 213 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 CSE1LP55060 971 aaKnown RBP17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 BFSP2Q13515 415 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 ZNF606Q8WXB4 792 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 SYTL2Q9HCH5 934 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 EXOSC4Q9NPD3 245 aaKnown RBP17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 APPL1Q9UKG1 709 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 RNF112Q9ULX5 631 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 NCOA3Q9Y6Q9 1424 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 DCDC2CA8MYV0 355 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 CXCL8P10145 99 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 ITGALP20701 1170 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 BLVRAP53004 296 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 CORO7P57737 925 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 GCNT1Q02742 428 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 MPP3Q13368 585 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 TEX9Q8N6V9 391 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 VCPIP1Q96JH7 1222 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 SHCBP1LQ9BZQ2 653 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 SHOC2Q9UQ13 582 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 DTNAQ9Y4J8 743 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 CAMSAP1Q5T5Y3 1602 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 SLCO1B7G3V0H7 640 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 PTENP60484 403 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 TGFB2P61812 414 aa17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 DDX39BQ13838 428 aaKnown RBP17.12■□□□□ 0.33
NSMCE3-201ENST00000332303 EZH2Q15910 746 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms