RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 PM20D1Q6GTS8 502 aa16.9■□□□□ 0.3
LRRC28-202ENST00000331450 WDR59Q6PJI9 974 aa16.9■□□□□ 0.3
LRRC28-202ENST00000331450 POTEHQ6S545 545 aa16.9■□□□□ 0.3
LRRC28-202ENST00000331450 TRIM72Q6ZMU5 477 aa16.9■□□□□ 0.3
LRRC28-202ENST00000331450 ZNF571Q7Z3V5 609 aaPredicted RBP16.9■□□□□ 0.3
LRRC28-202ENST00000331450 TMEM110Q86TL2 294 aa16.9■□□□□ 0.3
LRRC28-202ENST00000331450 CNGA4Q8IV77 575 aa16.9■□□□□ 0.3
LRRC28-202ENST00000331450 TMEM35BQ8NCS4 154 aa16.9■□□□□ 0.3
LRRC28-202ENST00000331450 OR8K1Q8NGG5 319 aa16.9■□□□□ 0.3
LRRC28-202ENST00000331450 CPXM1Q96SM3 734 aa16.9■□□□□ 0.3
LRRC28-202ENST00000331450 SCML2Q9UQR0 700 aa16.9■□□□□ 0.3
LRRC28-202ENST00000331450 MRPS23Q9Y3D9 190 aaKnown RBP16.9■□□□□ 0.3
LRRC28-202ENST00000331450 CEP83Q9Y592 693 aa16.9■□□□□ 0.3
LRRC28-202ENST00000331450 C5orf42Q9H799 3197 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 AKR1B15C9JRZ8 316 aaPredicted RBP16.89■□□□□ 0.29
LRRC28-202ENST00000331450 SERPING1P05155 500 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 SKILP12757 684 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 UNGP13051 313 aaPredicted RBP16.89■□□□□ 0.29
LRRC28-202ENST00000331450 GJA1P17302 382 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 ACADSBP45954 432 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 ADKP55263 362 aaKnown RBP16.89■□□□□ 0.29
LRRC28-202ENST00000331450 PTPN20Q4JDL3 420 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 SNX30Q5VWJ9 437 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 GET4Q7L5D6 327 aaPredicted RBP16.89■□□□□ 0.29
LRRC28-202ENST00000331450 NPAS3Q8IXF0 933 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 DRC7Q8IY82 874 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 TC2NQ8N9U0 490 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 PDZD8Q8NEN9 1154 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 FBXO32Q969P5 355 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 SLITRK1Q96PX8 696 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 ULBP1Q9BZM6 244 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 PDCL3Q9H2J4 239 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 LRRC4Q9HBW1 653 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 CNGB3Q9NQW8 809 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 ARHGAP20Q9P2F6 1191 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 TJP2Q9UDY2 1190 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 FAM50BQ9Y247 325 aa16.89■□□□□ 0.29
LRRC28-202ENST00000331450 BZW2Q9Y6E2 419 aaKnown RBP16.89■□□□□ 0.29
LRRC28-202ENST00000331450 E5RJQ4 531 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 ZBED1O96006 694 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 PLEKP08567 350 aaPredicted RBP16.88■□□□□ 0.29
LRRC28-202ENST00000331450 PPP3CCP48454 512 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 PGFP49763 221 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 DAOAP59103 153 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 MRPS5P82675 430 aaKnown RBP16.88■□□□□ 0.29
LRRC28-202ENST00000331450 CYP4F8P98187 520 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 CENPCQ03188 943 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 TEAD2Q15562 447 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 CLEC16AQ2KHT3 1053 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 STXBP5Q5T5C0 1151 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 NAA35Q5VZE5 725 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 SIX6OS1Q8N1H7 587 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 ING5Q8WYH8 240 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 FGF13Q92913 245 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 PPP1R13BQ96KQ4 1090 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 NOX5Q96PH1 765 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 MYADMQ96S97 322 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 PHF7Q9BWX1 381 aaPredicted RBP16.88■□□□□ 0.29
LRRC28-202ENST00000331450 ATXN3LQ9H3M9 355 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.88■□□□□ 0.29
LRRC28-202ENST00000331450 GMIPQ9P107 970 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 USTQ9Y2C2 406 aa16.88■□□□□ 0.29
LRRC28-202ENST00000331450 TCF20Q9UGU0 1960 aaKnown RBP16.88■□□□□ 0.29
LRRC28-202ENST00000331450 ZNF840PA6NDX5 716 aa16.87■□□□□ 0.29
LRRC28-202ENST00000331450 SOBPA7XYQ1 873 aa16.87■□□□□ 0.29
LRRC28-202ENST00000331450 PIK3R2O00459 728 aa16.87■□□□□ 0.29
LRRC28-202ENST00000331450 DDX3XO00571 662 aaKnown RBP eCLIP16.87■□□□□ 0.29
LRRC28-202ENST00000331450 PAPSS1O43252 624 aaPredicted RBP16.87■□□□□ 0.29
LRRC28-202ENST00000331450 ERBB2P04626 1255 aa16.87■□□□□ 0.29
LRRC28-202ENST00000331450 USP17L7P0C7H9 530 aa16.87■□□□□ 0.29
LRRC28-202ENST00000331450 LCP1P13796 627 aa16.87■□□□□ 0.29
LRRC28-202ENST00000331450 GABRB2P47870 512 aa16.87■□□□□ 0.29
LRRC28-202ENST00000331450 MRE11P49959 708 aa16.87■□□□□ 0.29
LRRC28-202ENST00000331450 TDRD12Q587J7 1177 aaKnown RBP16.87■□□□□ 0.29
LRRC28-202ENST00000331450 SCD5Q86SK9 330 aa16.87■□□□□ 0.29
LRRC28-202ENST00000331450 SLC30A5Q8TAD4 765 aa16.87■□□□□ 0.29
LRRC28-202ENST00000331450 CLEC4CQ8WTT0 213 aa16.87■□□□□ 0.29
LRRC28-202ENST00000331450 IRGQQ8WZA9 623 aa16.87■□□□□ 0.29
LRRC28-202ENST00000331450 ASB2Q96Q27 587 aa16.87■□□□□ 0.29
LRRC28-202ENST00000331450 GCNAQ96QF7 691 aa16.87■□□□□ 0.29
LRRC28-202ENST00000331450 NMUR1Q9HB89 426 aa16.87■□□□□ 0.29
LRRC28-202ENST00000331450 ST7Q9NRC1 585 aa16.87■□□□□ 0.29
LRRC28-202ENST00000331450 TRPM5Q9NZQ8 1165 aa16.87■□□□□ 0.29
LRRC28-202ENST00000331450 IMPACTQ9P2X3 320 aa16.87■□□□□ 0.29
LRRC28-202ENST00000331450 CDH7Q9ULB5 785 aa16.87■□□□□ 0.29
LRRC28-202ENST00000331450 FBXO21O94952 628 aa16.86■□□□□ 0.29
LRRC28-202ENST00000331450 OLFM2O95897 454 aa16.86■□□□□ 0.29
LRRC28-202ENST00000331450 OAS1P00973 400 aaKnown RBP16.86■□□□□ 0.29
LRRC28-202ENST00000331450 BMP1P13497 986 aa16.86■□□□□ 0.29
LRRC28-202ENST00000331450 FECHP22830 423 aa16.86■□□□□ 0.29
LRRC28-202ENST00000331450 MMP8P22894 467 aa16.86■□□□□ 0.29
LRRC28-202ENST00000331450 DDX6P26196 483 aaKnown RBP eCLIP16.86■□□□□ 0.29
LRRC28-202ENST00000331450 TUBP50607 506 aa16.86■□□□□ 0.29
LRRC28-202ENST00000331450 CDK17Q00537 523 aa16.86■□□□□ 0.29
LRRC28-202ENST00000331450 PTP4A2Q12974 167 aa16.86■□□□□ 0.29
LRRC28-202ENST00000331450 MAPK8IP2Q13387 824 aaPredicted RBP16.86■□□□□ 0.29
LRRC28-202ENST00000331450 GSE1Q14687 1217 aa16.86■□□□□ 0.29
LRRC28-202ENST00000331450 MON1AQ86VX9 555 aa16.86■□□□□ 0.29
LRRC28-202ENST00000331450 CPA5Q8WXQ8 436 aa16.86■□□□□ 0.29
LRRC28-202ENST00000331450 NDRG1Q92597 394 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms