RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 UBN1Q9NPG3 1134 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 KLK14Q9P0G3 267 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 XPO7Q9UIA9 1087 aaKnown RBP15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 GGT7Q9UJ14 662 aa15.53■□□□□ 0.08
CLCNKA-201ENST00000331433 SCN4AP35499 1836 aa15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 FAM47DPA6NHR8 397 aa15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 RRN3P2A6NIE6 340 aa15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 NDC80O14777 642 aa15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 PAPSS1O43252 624 aaPredicted RBP15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 CYP2C9P11712 490 aa15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 TFE3P19532 575 aaPredicted RBP15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 WDR4P57081 412 aaKnown RBP15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 STILQ15468 1287 aa15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 CA9Q16790 459 aa15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 FAM110CQ1W6H9 321 aa15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 SOWAHAQ2M3V2 549 aa15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 BBS9Q3SYG4 887 aa15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 BEST2Q8NFU1 509 aa15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 LRRN4Q8WUT4 740 aa15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 SLC35F5Q8WV83 523 aa15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 TMEM40Q8WWA1 233 aa15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 PARK7Q99497 189 aaKnown RBP15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 KDM4CQ9H3R0 1056 aa15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 TRABDQ9H4I3 376 aa15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 DERAQ9Y315 318 aa15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 TRIP12Q14669 1992 aaPredicted RBP15.52■□□□□ 0.08
CLCNKA-201ENST00000331433 A8MXQ7 604 aa15.52■□□□□ 0.07
CLCNKA-201ENST00000331433 OAS1P00973 400 aaKnown RBP15.52■□□□□ 0.07
CLCNKA-201ENST00000331433 PDGFRBP09619 1106 aa15.52■□□□□ 0.07
CLCNKA-201ENST00000331433 DARSP14868 501 aaKnown RBP15.52■□□□□ 0.07
CLCNKA-201ENST00000331433 IL4RP24394 825 aa15.52■□□□□ 0.07
CLCNKA-201ENST00000331433 SLC6A3Q01959 620 aa15.52■□□□□ 0.07
CLCNKA-201ENST00000331433 LACTB2Q53H82 288 aaPredicted RBP15.52■□□□□ 0.07
CLCNKA-201ENST00000331433 C9orf57Q5W0N0 161 aa15.52■□□□□ 0.07
CLCNKA-201ENST00000331433 CLEC4CQ8WTT0 213 aa15.52■□□□□ 0.07
CLCNKA-201ENST00000331433 DNAJB3Q8WWF6 145 aa15.52■□□□□ 0.07
CLCNKA-201ENST00000331433 RNF157Q96PX1 679 aa15.52■□□□□ 0.07
CLCNKA-201ENST00000331433 SLC4A5Q9BY07 1137 aa15.52■□□□□ 0.07
CLCNKA-201ENST00000331433 FAM124BQ9H5Z6 455 aaPredicted RBP15.52■□□□□ 0.07
CLCNKA-201ENST00000331433 ABCF3Q9NUQ8 709 aa15.52■□□□□ 0.07
CLCNKA-201ENST00000331433 TMEM51Q9NW97 253 aa15.52■□□□□ 0.07
CLCNKA-201ENST00000331433 HESX1Q9UBX0 185 aa15.52■□□□□ 0.07
CLCNKA-201ENST00000331433 RABGEF1Q9UJ41 708 aa15.52■□□□□ 0.07
CLCNKA-201ENST00000331433 RALGAPA2Q2PPJ7 1873 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 A0A1W2PPM1 405 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 A6NJR5 290 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 H7C0C1 242 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 F2P00734 622 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 CCDC130P13994 396 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 SDC4P31431 198 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 FOXN2P32314 431 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 ATP5OP48047 213 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 PPP1R21Q6ZMI0 780 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 C3orf62Q6ZUJ4 267 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 TMEM110Q86TL2 294 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 SESTD1Q86VW0 696 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 PLD5Q8N7P1 536 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 ATP11CQ8NB49 1132 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 PIN4Q9Y237 131 aaKnown RBP15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 USP15Q9Y4E8 981 aaPredicted RBP15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 HEY1Q9Y5J3 304 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 ADORA2BP29275 332 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 RDXP35241 583 aaKnown RBP15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 ZNF200P98182 395 aaPredicted RBP15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 NR1H3Q13133 447 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 TFDP2Q14188 446 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 ZNF618Q5T7W0 954 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 ALKAL1Q6UXT8 129 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 APBB1IPQ7Z5R6 666 aaPredicted RBP15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 LRRC52Q8N7C0 313 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 MAGEB18Q96M61 343 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 SNRNP25Q9BV90 132 aaKnown RBP15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 RNF39Q9H2S5 420 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 GOLGA2P5Q9HBQ8 144 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 CNTN3Q9P232 1028 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 PSMC3IPQ9P2W1 217 aaPredicted RBP15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 CPA4Q9UI42 421 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 CHMP2BQ9UQN3 213 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 NRCAMQ92823 1304 aa15.51■□□□□ 0.07
CLCNKA-201ENST00000331433 E7ESA3 106 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 DPYSL4O14531 572 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 SPTLC1O15269 473 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 FGFR1P11362 822 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 LMO2P25791 158 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 ATXN1P54253 815 aaKnown RBP15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 GEMIN4P57678 1058 aaKnown RBP15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 PPP6R3Q5H9R7 873 aaPredicted RBP15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 FAM47CQ5HY64 1035 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 EFHC2Q5JST6 749 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 SPRYD7Q5W111 196 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 OLFML2BQ68BL8 750 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 TRPM8Q7Z2W7 1104 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 IGDCC3Q8IVU1 814 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 PDIK1LQ8N165 341 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 PQLC3Q8N755 202 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 FBF1Q8TES7 1133 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 PCDH18Q9HCL0 1135 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 FLRT1Q9NZU1 646 aa15.5■□□□□ 0.07
CLCNKA-201ENST00000331433 ZMYND8Q9ULU4 1186 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms