RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 PBX4Q9BYU1 374 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 DPEP3Q9H4B8 488 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 PLEKHA4Q9H4M7 779 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 SLC28A3Q9HAS3 691 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 CNGB3Q9NQW8 809 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 CWC15Q9P013 229 aaKnown RBP9.99□□□□□ -0.81
C11orf54-201ENST00000331239 CACNG4Q9UBN1 327 aa9.99□□□□□ -0.81
C11orf54-201ENST00000331239 RANBP2P49792 3224 aaKnown RBP9.98□□□□□ -0.81
C11orf54-201ENST00000331239 IGFBP6P24592 240 aaPredicted RBP9.98□□□□□ -0.81
C11orf54-201ENST00000331239 HOXA9P31269 272 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 GPM6BQ13491 265 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 ACAP1Q15027 740 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 FAM109BQ6ICB4 259 aaPredicted RBP9.98□□□□□ -0.81
C11orf54-201ENST00000331239 PLEKHA7Q6IQ23 1121 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 GPR153Q6NV75 609 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 C8orf74Q6P047 294 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 DENND1BQ6P3S1 775 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 TMCO2Q7Z6W1 182 aaPredicted RBP9.98□□□□□ -0.81
C11orf54-201ENST00000331239 ARHGAP18Q8N392 663 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 PLCD3Q8N3E9 789 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 TMEM130Q8N3G9 435 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 WDTC1Q8N5D0 677 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 FNIP1Q8TF40 1166 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 MED10Q9BTT4 135 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 FBXO44Q9H4M3 255 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 PARVAQ9NVD7 372 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 RRN3Q9NYV6 651 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 SMARCAL1Q9NZC9 954 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 ADAM22Q9P0K1 906 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 STIM2Q9P246 746 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 HCSTQ9UBK5 93 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 RNF14Q9UBS8 474 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 DMGDHQ9UI17 866 aaKnown RBP9.98□□□□□ -0.81
C11orf54-201ENST00000331239 PCDHGC5Q9Y5F6 944 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 TIMM13Q9Y5L4 95 aaPredicted RBP9.98□□□□□ -0.81
C11orf54-201ENST00000331239 LCHNA4D1U4 455 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 GOLGA6BA6NDN3 693 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 F8W810 466 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 CXCL14O95715 111 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 FGF19O95750 216 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 CA3P07451 260 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 PFKLP17858 780 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 POU3F3P20264 500 aaPredicted RBP9.98□□□□□ -0.81
C11orf54-201ENST00000331239 PSEN1P49768 467 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 PTP4A2Q12974 167 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 PDCLQ13371 301 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 PM20D1Q6GTS8 502 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 LILRA6Q6PI73 481 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 CLEC20AQ6ZU45 233 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 TAS1R1Q7RTX1 841 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 LRRTM3Q86VH5 581 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 TTC30AQ86WT1 665 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 C12orf29Q8N999 325 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 C3orf20Q8ND61 904 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 RFFLQ8WZ73 363 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 ELMO3Q96BJ8 720 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 MCRS1Q96EZ8 462 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 USP3Q9Y6I4 520 aa9.98□□□□□ -0.81
C11orf54-201ENST00000331239 FAM92AA1XBS5 289 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 MTMR11A4FU01 709 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 PALMO75781 387 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 AP1G2O75843 785 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 TNFRSF8P28908 595 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 GGCXP38435 758 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 GALCP54803 685 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 ROR1Q01973 937 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 SLC39A12Q504Y0 691 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 EFHC1Q5JVL4 640 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 NAA35Q5VZE5 725 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 EMBQ6PCB8 327 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 SND1Q7KZF4 910 aaKnown RBP eCLIP9.97□□□□□ -0.81
C11orf54-201ENST00000331239 TMC7Q7Z402 723 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 POF1BQ8WVV4 589 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 KLHL5Q96PQ7 755 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 RBM12Q9NTZ6 932 aaKnown RBP9.97□□□□□ -0.81
C11orf54-201ENST00000331239 SEPT11Q9NVA2 429 aaKnown RBP9.97□□□□□ -0.81
C11orf54-201ENST00000331239 ZMYM5Q9UJ78 669 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 YBX2Q9Y2T7 364 aaKnown RBP9.97□□□□□ -0.81
C11orf54-201ENST00000331239 CDY1Q9Y6F8 540 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 C2orf71A6NGG8 1288 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 SIGLEC16A6NMB1 481 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 ATP2C2O75185 946 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 IVLP07476 585 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 HNRNPA1P09651 372 aaKnown RBP eCLIP9.97□□□□□ -0.81
C11orf54-201ENST00000331239 CPB1P15086 417 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 DESP17661 470 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 ACAT1P24752 427 aaKnown RBP9.97□□□□□ -0.81
C11orf54-201ENST00000331239 RABGGTBP53611 331 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 PSMC1P62191 440 aaKnown RBP9.97□□□□□ -0.81
C11orf54-201ENST00000331239 MTA1Q13330 715 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 GLE1Q53GS7 698 aaKnown RBP9.97□□□□□ -0.81
C11orf54-201ENST00000331239 PPP2R2DQ66LE6 453 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 ITIH5Q86UX2 942 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 LEMD2Q8NC56 503 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 TIFAQ96CG3 184 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 TRMT2BQ96GJ1 504 aaKnown RBP9.97□□□□□ -0.81
C11orf54-201ENST00000331239 CDK5RAP1Q96SZ6 601 aaKnown RBP9.97□□□□□ -0.81
C11orf54-201ENST00000331239 TTLL2Q9BWV7 592 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 KRT82Q9NSB4 513 aa9.97□□□□□ -0.81
C11orf54-201ENST00000331239 COL4A4P53420 1690 aaPredicted RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms