RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ATICP31939 592 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 DEKP35659 375 aaKnown RBP6.79□□□□□ -1.32
SMG1-201ENST00000330588 NUCB2P80303 420 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 NHLH1Q02575 133 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 SPAG1Q07617 926 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 TWF1Q12792 350 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 KCNB1Q14721 858 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 VEPH1Q14D04 833 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 TRIP4Q15650 581 aaPredicted RBP6.79□□□□□ -1.32
SMG1-201ENST00000330588 MAPRE1Q15691 268 aaKnown RBP6.79□□□□□ -1.32
SMG1-201ENST00000330588 SNRNP35Q16560 246 aaKnown RBP6.79□□□□□ -1.32
SMG1-201ENST00000330588 DUOXA2Q1HG44 320 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 SLC5A9Q2M3M2 681 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 CFAP221Q4G0U5 840 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 CWF19L1Q69YN2 538 aaKnown RBP6.79□□□□□ -1.32
SMG1-201ENST00000330588 PDZD4Q76G19 769 aaPredicted RBP6.79□□□□□ -1.32
SMG1-201ENST00000330588 TMC8Q8IU68 726 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 KIAA1958Q8N8K9 716 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 XXYLT1Q8NBI6 393 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 ITFG1Q8TB96 612 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 GPR152Q8TDT2 470 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 SCFD1Q8WVM8 642 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 EDEM1Q92611 657 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 CCDC47Q96A33 483 aaKnown RBP6.79□□□□□ -1.32
SMG1-201ENST00000330588 SAAL1Q96ER3 474 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 PAGE5Q96GU1 130 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 ASB16Q96NS5 453 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 NELL2Q99435 816 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 CGRRF1Q99675 332 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 MFSD1Q9H3U5 465 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 ARHGEF3Q9NR81 526 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 EXOC1Q9NV70 894 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 DMAC2Q9NW81 257 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 HCFC1R1Q9NWW0 138 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 CEP72Q9P209 647 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 SIX4Q9UIU6 781 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 FBXL21Q9UKT6 434 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 COL4A2P08572 1712 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 SCN1AP35498 2009 aa6.79□□□□□ -1.32
SMG1-201ENST00000330588 KIF26AQ9ULI4 1882 aaPredicted RBP6.79□□□□□ -1.32
SMG1-201ENST00000330588 TACC1O75410 805 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 ITGB3P05106 788 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 PFKLP17858 780 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 FCARP24071 287 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 CDC25CP30307 473 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 POLR2BP30876 1174 aaKnown RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 MAGEA11P43364 429 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 SYKP43405 635 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 GUCY2FP51841 1108 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 NTHL1P78549 312 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 TFAMQ00059 246 aaKnown RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 MYL7Q01449 175 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 TSPY1Q01534 308 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 CYP24A1Q07973 514 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 COBLL1Q53SF7 1204 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 WSCD1Q658N2 575 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 PARM1Q6UWI2 310 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 PRR23CQ6ZRP0 262 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 ELOA2Q8IYF1 753 aaPredicted RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 CCDC105Q8IYK2 499 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 TMEM130Q8N3G9 435 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 PDCL2Q8N4E4 241 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 CSGALNACT2Q8N6G5 542 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 PRSS33Q8NF86 280 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 OR10T2Q8NGX3 314 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 IPO4Q8TEX9 1081 aaKnown RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 FGF14Q92915 247 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 SMARCD2Q92925 531 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 TRMT2BQ96GJ1 504 aaKnown RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 FNBP1Q96RU3 617 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 PKMYT1Q99640 499 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 CORO1BQ9BR76 489 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 RBCK1Q9BYM8 510 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 MTMR12Q9C0I1 747 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 DNAJC25Q9H1X3 360 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 SEMA4AQ9H3S1 761 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 FAM124BQ9H5Z6 455 aaPredicted RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 ZFP14Q9HCL3 533 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 PDE11AQ9HCR9 933 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 UXTQ9UBK9 157 aaPredicted RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 AGAP1Q9UPQ3 857 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 TRAF3IP3Q9Y228 551 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 R3HCC1Q9Y3T6 440 aaKnown RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 PCDHB5Q9Y5E4 795 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 MYO10Q9HD67 2058 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 SPTBN5Q9NRC6 3674 aaKnown RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 IKBKBO14920 756 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 NARSO43776 548 aaKnown RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 MOSPD3O75425 235 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 CSH1P0DML2 217 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 CSH2P0DML3 217 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 HAPLN1P10915 354 aaPredicted RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 CEBPBP17676 345 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 WARSP23381 471 aaKnown RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 MZF1P28698 734 aaPredicted RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 SOX18P35713 384 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 RPS9P46781 194 aaKnown RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 VCPP55072 806 aaKnown RBP6.78□□□□□ -1.32
SMG1-201ENST00000330588 ARPP19P56211 112 aa6.78□□□□□ -1.32
SMG1-201ENST00000330588 RPL10AP62906 217 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms