RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 GTF2H3Q13889 308 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 FCRLBQ6BAA4 426 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 DTX2Q86UW9 622 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 HASPINQ8TF76 798 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 RTFDC1Q9BY42 306 aaPredicted RBP2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 PADI4Q9UM07 663 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 SH2B3Q9UQQ2 575 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 FRMD4BQ9Y2L6 1034 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 TMX2Q9Y320 296 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 SPATA31E1Q6ZUB1 1445 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 A0A088AWK7 358 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 DCLK1O15075 740 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 PPM1DO15297 605 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 UBXN7O94888 489 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 ONECUT2O95948 504 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 XRCC6P12956 609 aaKnown RBP eCLIP2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 LILRA4P59901 499 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 BOP1Q14137 746 aaKnown RBP2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 E2F2Q14209 437 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 ODR4Q5SWX8 454 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 ARHGAP40Q5TG30 622 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 ANKRD16Q6P6B7 361 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 DEFB132Q7Z7B7 95 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 SERTAD4Q9NUC0 356 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 ZIM2Q9NZV7 527 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 STAP2Q9UGK3 403 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 SERTAD3Q9UJW9 196 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 PAXBP1Q9Y5B6 917 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 KIAA1107Q9UPP5 1409 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 CLTCQ00610 1675 aaKnown RBP2□□□□□ -2.09
CCDC144A-201ENST00000328495 MSH6P52701 1360 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 PIEZO1Q92508 2521 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 A0A1W2PPL8 197 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 ITPKBP27987 946 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 LRPAP1P30533 357 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 WNT3P56703 355 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 PROK1P58294 105 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 SLC10A2Q12908 348 aaPredicted RBP2□□□□□ -2.09
CCDC144A-201ENST00000328495 KIAA1614Q5VZ46 1190 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 LMBRD2Q68DH5 695 aaPredicted RBP2□□□□□ -2.09
CCDC144A-201ENST00000328495 RGS7BPQ6MZT1 257 aaPredicted RBP2□□□□□ -2.09
CCDC144A-201ENST00000328495 CXorf57Q6NSI4 855 aaKnown RBP2□□□□□ -2.09
CCDC144A-201ENST00000328495 CEP85Q6P2H3 762 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 ZNF783Q6ZMS7 281 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 SLC29A4Q7RTT9 530 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 WDR53Q7Z5U6 358 aaPredicted RBP2□□□□□ -2.09
CCDC144A-201ENST00000328495 TPH2Q8IWU9 490 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 CELF5Q8N6W0 485 aaKnown RBP2□□□□□ -2.09
CCDC144A-201ENST00000328495 PLBD2Q8NHP8 589 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 SLC35G2Q8TBE7 412 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 TBC1D5Q92609 795 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 MRGPRX1Q96LB2 322 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 GLOD4Q9HC38 313 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 SERHLQ9NQF3 203 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 XPR1Q9UBH6 696 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 DKK3Q9UBP4 350 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 GABBR1Q9UBS5 961 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 MLH3Q9UHC1 1453 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 C5P01031 1676 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 DENND4BO75064 1496 aaPredicted RBP2□□□□□ -2.09
CCDC144A-201ENST00000328495 HNRNPCP07910 306 aaKnown RBP eCLIP2□□□□□ -2.09
CCDC144A-201ENST00000328495 LMO1P25800 156 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 PCSK6P29122 969 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 AAK1Q2M2I8 961 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 AARS2Q5JTZ9 985 aaKnown RBP2□□□□□ -2.09
CCDC144A-201ENST00000328495 OR6B3Q8NGW1 331 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 KBTBD7Q8WVZ9 684 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 TAAR9Q96RI9 348 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 ACO2Q99798 780 aaKnown RBP2□□□□□ -2.09
CCDC144A-201ENST00000328495 ADAMTSL1Q8N6G6 1762 aa2□□□□□ -2.09
CCDC144A-201ENST00000328495 ZNF646O15015 1829 aaPredicted RBP2□□□□□ -2.09
CCDC144A-201ENST00000328495 MANSC4A6NHS7 340 aaPredicted RBP1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 LINC01548A6NM66 108 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 QSOX1O00391 747 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 PHGDHO43175 533 aaKnown RBP1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 S100BP04271 92 aaPredicted RBP1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 PRKCGP05129 697 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 PDHA1P08559 390 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 IL6RP08887 468 aaPredicted RBP1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 SLC11A2P49281 568 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 CLCN2P51788 898 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 UCP3P55916 312 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 GPSM2P81274 684 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 KRT17Q04695 432 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 MGAT5BQ3V5L5 792 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 ANO6Q4KMQ2 910 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 SLC44A4Q53GD3 710 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 TREML2Q5T2D2 321 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 B3GNT9Q6UX72 402 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 EPM2AIP1Q7L775 607 aaPredicted RBP1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 MAVSQ7Z434 540 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 SRRM1Q8IYB3 904 aaKnown RBP1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 LRRC71Q8N4P6 559 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 ZBTB34Q8NCN2 500 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 PPP1R35Q8TAP8 253 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 ATG4AQ8WYN0 398 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 TRIM54Q9BYV2 358 aa1.99□□□□□ -2.09
CCDC144A-201ENST00000328495 ZSCAN32Q9NX65 697 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms