RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 AIFM2Q9BRQ8 373 aa4.64□□□□□ -1.67
SKP1-201ENST00000328392 C17orf80Q9BSJ5 609 aa4.64□□□□□ -1.67
SKP1-201ENST00000328392 KRTAP17-1Q9BYP8 105 aa4.64□□□□□ -1.67
SKP1-201ENST00000328392 STK33Q9BYT3 514 aa4.64□□□□□ -1.67
SKP1-201ENST00000328392 AMBRA1Q9C0C7 1298 aa4.64□□□□□ -1.67
SKP1-201ENST00000328392 XPNPEP3Q9NQH7 507 aa4.64□□□□□ -1.67
SKP1-201ENST00000328392 TBCCD1Q9NVR7 557 aa4.64□□□□□ -1.67
SKP1-201ENST00000328392 RGL1Q9NZL6 768 aa4.64□□□□□ -1.67
SKP1-201ENST00000328392 IGSF9Q9P2J2 1179 aa4.64□□□□□ -1.67
SKP1-201ENST00000328392 SNX14Q9Y5W7 946 aa4.64□□□□□ -1.67
SKP1-201ENST00000328392 COL11A2P13942 1736 aaPredicted RBP4.63□□□□□ -1.67
SKP1-201ENST00000328392 CLCA1A8K7I4 914 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 MGST3O14880 152 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 CCP110O43303 1012 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 COQ9O75208 318 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 SOAT2O75908 522 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 SRGAP2BP0DMP2 458 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 IDEP14735 1019 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 PDIA3P30101 505 aaKnown RBP4.63□□□□□ -1.67
SKP1-201ENST00000328392 PGDP52209 483 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 BLOC1S1P78537 153 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 ZRSR2Q15696 482 aaKnown RBP4.63□□□□□ -1.67
SKP1-201ENST00000328392 TBCCQ15814 346 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 TIGD6Q17RP2 521 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 ZNF750Q32MQ0 723 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 PRR16Q569H4 304 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 FAXCQ5TGI0 409 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 SP5Q6BEB4 398 aaPredicted RBP4.63□□□□□ -1.67
SKP1-201ENST00000328392 SIMC1Q8NDZ2 872 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 OSCP1Q8WVF1 389 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 TFAP2BQ92481 460 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 R3HDM4Q96D70 268 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 ZC3H10Q96K80 434 aaKnown RBP4.63□□□□□ -1.67
SKP1-201ENST00000328392 SLC25A32Q9H2D1 315 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 GRHPRQ9UBQ7 328 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 DKK4Q9UBT3 224 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 CCNL1Q9UK58 526 aaPredicted RBP4.63□□□□□ -1.67
SKP1-201ENST00000328392 SCAF8Q9UPN6 1271 aaKnown RBP4.63□□□□□ -1.67
SKP1-201ENST00000328392 PCDHGB3Q9Y5G1 929 aa4.63□□□□□ -1.67
SKP1-201ENST00000328392 AQP7P3A6NL99 342 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 AGPSO00116 658 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 YY2O15391 372 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 ASNA1O43681 348 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 PPFIA2O75334 1257 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 SKAP2O75563 359 aaPredicted RBP4.62□□□□□ -1.67
SKP1-201ENST00000328392 FESP07332 822 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 PPIFP30405 207 aaKnown RBP4.62□□□□□ -1.67
SKP1-201ENST00000328392 PPM1FP49593 454 aaPredicted RBP4.62□□□□□ -1.67
SKP1-201ENST00000328392 PDE6CP51160 858 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 COPAP53621 1224 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 SIM1P81133 766 aaPredicted RBP4.62□□□□□ -1.67
SKP1-201ENST00000328392 GALNT1Q10472 559 aaPredicted RBP4.62□□□□□ -1.67
SKP1-201ENST00000328392 GPS1Q13098 491 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 BLMHQ13867 455 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 ZNF169Q14929 603 aaPredicted RBP4.62□□□□□ -1.67
SKP1-201ENST00000328392 PDCD2Q16342 344 aaPredicted RBP4.62□□□□□ -1.67
SKP1-201ENST00000328392 INO80DQ53TQ3 878 aaPredicted RBP4.62□□□□□ -1.67
SKP1-201ENST00000328392 TMTC4Q5T4D3 741 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 MANEALQ5VSG8 457 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 SLC9A4Q6AI14 798 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 SFRP4Q6FHJ7 346 aaPredicted RBP4.62□□□□□ -1.67
SKP1-201ENST00000328392 CLEC9AQ6UXN8 241 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 DPY19L3Q6ZPD9 716 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 NTN5Q8WTR8 489 aaPredicted RBP4.62□□□□□ -1.67
SKP1-201ENST00000328392 XAGE5Q8WWM1 108 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 GLG1Q92896 1179 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 GRAMD1AQ96CP6 724 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 LTV1Q96GA3 475 aaPredicted RBP4.62□□□□□ -1.67
SKP1-201ENST00000328392 BBC3Q96PG8 261 aaPredicted RBP4.62□□□□□ -1.67
SKP1-201ENST00000328392 HIST1H2AAQ96QV6 131 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 PRPF18Q99633 342 aaKnown RBP4.62□□□□□ -1.67
SKP1-201ENST00000328392 SORBS1Q9BX66 1292 aaKnown RBP4.62□□□□□ -1.67
SKP1-201ENST00000328392 R3HDMLQ9H3Y0 253 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 KCTD5Q9NXV2 234 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 FOXJ2Q9P0K8 574 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 DKK3Q9UBP4 350 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 SPATA31A3Q5VYP0 1347 aa4.62□□□□□ -1.67
SKP1-201ENST00000328392 hCG_1642624A0A1W2PR95 340 aa4.61□□□□□ -1.67
SKP1-201ENST00000328392 VWC2LB2RUY7 222 aa4.61□□□□□ -1.67
SKP1-201ENST00000328392 HNRNPDLO14979 420 aaKnown RBP4.61□□□□□ -1.67
SKP1-201ENST00000328392 CD3EAPO15446 510 aaKnown RBP4.61□□□□□ -1.67
SKP1-201ENST00000328392 CSTBP04080 98 aaKnown RBP4.61□□□□□ -1.67
SKP1-201ENST00000328392 GYS1P13807 737 aa4.61□□□□□ -1.67
SKP1-201ENST00000328392 UQCRC1P31930 480 aa4.61□□□□□ -1.67
SKP1-201ENST00000328392 LIPAP38571 399 aa4.61□□□□□ -1.67
SKP1-201ENST00000328392 MTHFSP49914 203 aa4.61□□□□□ -1.67
SKP1-201ENST00000328392 PDE1AP54750 535 aa4.61□□□□□ -1.67
SKP1-201ENST00000328392 CCNIQ14094 377 aa4.61□□□□□ -1.67
SKP1-201ENST00000328392 SPARCL1Q14515 664 aa4.61□□□□□ -1.67
SKP1-201ENST00000328392 P3H1Q32P28 736 aa4.61□□□□□ -1.67
SKP1-201ENST00000328392 ZACNQ401N2 412 aa4.61□□□□□ -1.67
SKP1-201ENST00000328392 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.61□□□□□ -1.67
SKP1-201ENST00000328392 ZNF362Q5T0B9 420 aaPredicted RBP4.61□□□□□ -1.67
SKP1-201ENST00000328392 TREML2Q5T2D2 321 aa4.61□□□□□ -1.67
SKP1-201ENST00000328392 CERCAMQ5T4B2 595 aa4.61□□□□□ -1.67
SKP1-201ENST00000328392 STRIP1Q5VSL9 837 aa4.61□□□□□ -1.67
SKP1-201ENST00000328392 DPY19L2P1Q6NXN4 242 aa4.61□□□□□ -1.67
SKP1-201ENST00000328392 KRT28Q7Z3Y7 464 aa4.61□□□□□ -1.67
SKP1-201ENST00000328392 MAVSQ7Z434 540 aa4.61□□□□□ -1.67
SKP1-201ENST00000328392 ADGRG3Q86Y34 549 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms