RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 EFHC1Q5JVL4 640 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 PLPP4Q5VZY2 271 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 ARCQ7LC44 396 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 FNIP1Q8TF40 1166 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 CLEC4CQ8WTT0 213 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 BTBD6Q96KE9 485 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 KLHL5Q96PQ7 755 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 NAPGQ99747 312 aaPredicted RBP10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 NGRNQ9NPE2 291 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 RRAGDQ9NQL2 400 aaPredicted RBP10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 IP6K2Q9UHH9 426 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 SLC27A5Q9Y2P5 690 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 JRKLQ9Y4A0 524 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 USP3Q9Y6I4 520 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 GREB1Q4ZG55 1949 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 C2orf71A6NGG8 1288 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 TMEM110-MUSTN1A8MSY1 372 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 MYO1FO00160 1098 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 GRM6O15303 877 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 HSF2BPO75031 334 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 DAB1O75553 588 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 PROSCO94903 275 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 FTCDO95954 541 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 GLI1P08151 1106 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 RFC1P35251 1148 aaPredicted RBP10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 TUFMP49411 452 aaKnown RBP10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 GPM6BQ13491 265 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 MESDQ14696 234 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 PPP2R2DQ66LE6 453 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 PM20D1Q6GTS8 502 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 PDE12Q6L8Q7 609 aaKnown RBP10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 NIPA2Q8N8Q9 360 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 MRPL43Q8N983 215 aaKnown RBP10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 KHSRPQ92945 711 aaKnown RBP eCLIP10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 COMMD8Q9NX08 183 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 TNRC18O15417 2968 aaPredicted RBP10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 CTAGE9A4FU28 777 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 C2CD4BA6NLJ0 364 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 DPYSL4O14531 572 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 LPXNO60711 386 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 SOAT2O75908 522 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 SEC24AO95486 1093 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 ATF6P18850 670 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 OGDHQ02218 1023 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 ZNF252P-AS1Q0IIN9 211 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 TAF5Q15542 800 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 SDHAF4Q5VUM1 108 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 BHLHA9Q7RTU4 235 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 NUP93Q8N1F7 819 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 EMC1Q8N766 993 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 KIF18AQ8NI77 898 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 PRO3102Q9H379 93 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 GOLPH3Q9H4A6 298 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 IL37Q9NZH6 218 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 YIPF1Q9Y548 306 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 ATG2AQ2TAZ0 1938 aa10.75□□□□□ -0.69
VIPAS39-201ENST00000327028 CHD9Q3L8U1 2897 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 RTN3O95197 1032 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 USP17L7P0C7H9 530 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 GPD1P21695 349 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 SLC1A1P43005 524 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 CAMK1Q14012 370 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 PIGHQ14442 188 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 MEI1Q5TIA1 1274 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 PEX26Q7Z412 305 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 NT5DC3Q86UY8 548 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 TCEAL8Q8IYN2 117 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 SCAMP5Q8TAC9 235 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 ZNF592Q92610 1267 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 FBXO44Q9H4M3 255 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 CYP4F11Q9HBI6 524 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 ALG6Q9Y672 507 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 HIDE1A8MVS5 230 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 GRAP2O75791 330 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 ATP1A1P05023 1023 aaKnown RBP10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 COMTP21964 271 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 PSMA2P25787 234 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 ELF1P32519 619 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 FLT3P36888 993 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 ZNF143P52747 638 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 SMAD3P84022 425 aaKnown RBP10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 TRNP1Q6NT89 227 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 RXFP2Q8WXD0 754 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 NDRG1Q92597 394 aaKnown RBP10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 SLC2A13Q96QE2 648 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 CNPY3Q9BT09 278 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 TRIM62Q9BVG3 475 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 LMAN2LQ9H0V9 348 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 SLC28A3Q9HAS3 691 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 FBXW11Q9UKB1 542 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 AMFRQ9UKV5 643 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 SCML2Q9UQR0 700 aa10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 ZNF638Q14966 1978 aaKnown RBP10.74□□□□□ -0.69
VIPAS39-201ENST00000327028 FAM92AA1XBS5 289 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 TGM5O43548 720 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 C1RP00736 705 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 LTFP02788 710 aa10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 RNASE9P60153 205 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-201ENST00000327028 YWHAZP63104 245 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms