RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 RBM10P98175 930 aaKnown RBP16.06■□□□□ 0.16
PRPF3-201ENST00000324862 SLC6A3Q01959 620 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 RAB33AQ14088 237 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 ZNF268Q14587 947 aaPredicted RBP16.06■□□□□ 0.16
PRPF3-201ENST00000324862 BHLHA9Q7RTU4 235 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 RBM23Q86U06 439 aaKnown RBP16.06■□□□□ 0.16
PRPF3-201ENST00000324862 MRPL43Q8N983 215 aaKnown RBP16.06■□□□□ 0.16
PRPF3-201ENST00000324862 SPPL2BQ8TCT7 592 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 KLHL5Q96PQ7 755 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 PRO3102Q9H379 93 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 RXFP1Q9HBX9 757 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 MSRAQ9UJ68 235 aa16.06■□□□□ 0.16
PRPF3-201ENST00000324862 PTPRDP23468 1912 aa16.05■□□□□ 0.16
PRPF3-201ENST00000324862 ATP8B3O60423 1300 aa16.05■□□□□ 0.16
PRPF3-201ENST00000324862 RNF10Q8N5U6 811 aaKnown RBP16.05■□□□□ 0.16
PRPF3-201ENST00000324862 FAM149B1Q96BN6 582 aa16.05■□□□□ 0.16
PRPF3-201ENST00000324862 UVRAGQ9P2Y5 699 aa16.05■□□□□ 0.16
PRPF3-201ENST00000324862 AFF4Q9UHB7 1163 aaKnown RBP16.05■□□□□ 0.16
PRPF3-201ENST00000324862 TMEM59LQ9UK28 342 aa16.05■□□□□ 0.16
PRPF3-201ENST00000324862 RWDD3Q9Y3V2 267 aa16.05■□□□□ 0.16
PRPF3-201ENST00000324862 SIGLEC16A6NMB1 481 aa16.05■□□□□ 0.16
PRPF3-201ENST00000324862 H3BNC9 293 aa16.05■□□□□ 0.16
PRPF3-201ENST00000324862 ATP1A1P05023 1023 aaKnown RBP16.05■□□□□ 0.16
PRPF3-201ENST00000324862 PITX1P78337 314 aaPredicted RBP16.05■□□□□ 0.16
PRPF3-201ENST00000324862 MRPS5P82675 430 aaKnown RBP16.05■□□□□ 0.16
PRPF3-201ENST00000324862 VSTM1Q6UX27 236 aa16.05■□□□□ 0.16
PRPF3-201ENST00000324862 ADGRD2Q7Z7M1 963 aa16.05■□□□□ 0.16
PRPF3-201ENST00000324862 TXLNBQ8N3L3 684 aa16.05■□□□□ 0.16
PRPF3-201ENST00000324862 MSANTD4Q8NCY6 345 aa16.05■□□□□ 0.16
PRPF3-201ENST00000324862 CFAP57Q96MR6 1250 aa16.05■□□□□ 0.16
PRPF3-201ENST00000324862 LZTS1Q9Y250 596 aa16.05■□□□□ 0.16
PRPF3-201ENST00000324862 TRIOBPQ9H2D6 2365 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 CARNS1A5YM72 827 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 KLRC2P26717 231 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 C15orf59Q2T9L4 293 aaPredicted RBP16.04■□□□□ 0.16
PRPF3-201ENST00000324862 MRPL47Q9HD33 250 aaKnown RBP16.04■□□□□ 0.16
PRPF3-201ENST00000324862 CALCOCO1Q9P1Z2 691 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 NUDT5Q9UKK9 219 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 MAGED2Q9UNF1 606 aaPredicted RBP16.04■□□□□ 0.16
PRPF3-201ENST00000324862 USTQ9Y2C2 406 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 ALG6Q9Y672 507 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 SCINQ9Y6U3 715 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 MTA2O94776 668 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 ZBED1O96006 694 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 FYNP06241 537 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 RB1P06400 928 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 COMTP21964 271 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 MAGEA11P43364 429 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 ACADSBP45954 432 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 DAOAP59103 153 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 DNTTIP2Q5QJE6 756 aaKnown RBP16.04■□□□□ 0.16
PRPF3-201ENST00000324862 SYPL2Q5VXT5 272 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 EDEM1Q92611 657 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 C8orf48Q96LL4 319 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 OXCT2Q9BYC2 517 aaPredicted RBP16.04■□□□□ 0.16
PRPF3-201ENST00000324862 ABCB6Q9NP58 842 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 FNIP2Q9P278 1114 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 USP3Q9Y6I4 520 aa16.04■□□□□ 0.16
PRPF3-201ENST00000324862 MYO1FO00160 1098 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 PRRG1O14668 218 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 MARCKSL1P49006 195 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 ATXN1P54253 815 aaKnown RBP16.03■□□□□ 0.16
PRPF3-201ENST00000324862 GSCP56915 257 aaPredicted RBP16.03■□□□□ 0.16
PRPF3-201ENST00000324862 ATP11AP98196 1134 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 SMC1AQ14683 1233 aaKnown RBP16.03■□□□□ 0.16
PRPF3-201ENST00000324862 CDO1Q16878 200 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 PPP1R2P3Q6NXS1 205 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 ARFGAP1Q8N6T3 406 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 TRIM58Q8NG06 486 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 RXFP2Q8WXD0 754 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 TIFAQ96CG3 184 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 NMUR1Q9HB89 426 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.03■□□□□ 0.16
PRPF3-201ENST00000324862 WDR35Q9P2L0 1181 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 NAALADL1Q9UQQ1 740 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 YIPF1Q9Y548 306 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 MYO9BQ13459 2157 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 FSCN2O14926 492 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 TRIM66O15016 1216 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 TCEAL1Q15170 157 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 RAB30Q15771 203 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 DENND5BQ6ZUT9 1274 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 NUP93Q8N1F7 819 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 SLC7A14Q8TBB6 771 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 ADAM32Q8TC27 787 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 OSER1Q9NX31 292 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 IRAK3Q9Y616 596 aa16.03■□□□□ 0.16
PRPF3-201ENST00000324862 C2CD4BA6NLJ0 364 aa16.02■□□□□ 0.16
PRPF3-201ENST00000324862 SRGAP2O75044 1071 aa16.02■□□□□ 0.16
PRPF3-201ENST00000324862 PDGFRAP16234 1089 aa16.02■□□□□ 0.16
PRPF3-201ENST00000324862 CXCR5P32302 372 aa16.02■□□□□ 0.16
PRPF3-201ENST00000324862 GTF2F1P35269 517 aaKnown RBP eCLIP16.02■□□□□ 0.162e-14■■■■■ 47.9
PRPF3-201ENST00000324862 HADHBP55084 474 aaKnown RBP16.02■□□□□ 0.16
PRPF3-201ENST00000324862 TWF1Q12792 350 aa16.02■□□□□ 0.16
PRPF3-201ENST00000324862 TPGS2Q68CL5 300 aa16.02■□□□□ 0.16
PRPF3-201ENST00000324862 LILRA6Q6PI73 481 aa16.02■□□□□ 0.16
PRPF3-201ENST00000324862 SLC26A9Q7LBE3 791 aa16.02■□□□□ 0.16
PRPF3-201ENST00000324862 SLFN11Q7Z7L1 901 aa16.02■□□□□ 0.16
PRPF3-201ENST00000324862 NT5DC3Q86UY8 548 aa16.02■□□□□ 0.16
PRPF3-201ENST00000324862 DEFB106AQ8N104 65 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms