RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 KLHL29Q96CT2 875 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 SLC10A4Q96EP9 437 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 PIWIL1Q96J94 861 aaKnown RBP12.54□□□□□ -0.4
NCL-201ENST00000322723 FAM118BQ9BPY3 351 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 USP29Q9HBJ7 922 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 NXF1Q9UBU9 619 aaKnown RBP12.54□□□□□ -0.4
NCL-201ENST00000322723 USP18Q9UMW8 372 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 hCG_2014768A0A024R1R8 64 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 IQCA1LA6NCM1 817 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 H0Y3Z8 333 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 ACSL3O95573 720 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 GPD1P21695 349 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 PTPN9P43378 593 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 CCNHP51946 323 aaPredicted RBP12.54□□□□□ -0.4
NCL-201ENST00000322723 OSTNP61366 133 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 SPRYD7Q5W111 196 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 PPIL6Q8IXY8 311 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 ACTL9Q8TC94 416 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 ARHGEF2Q92974 986 aaKnown RBP12.54□□□□□ -0.4
NCL-201ENST00000322723 MIS12Q9H081 205 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 NSRP1Q9H0G5 558 aaKnown RBP12.54□□□□□ -0.4
NCL-201ENST00000322723 RSAD1Q9HA92 442 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 RABGEF1Q9UJ41 708 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 USP3Q9Y6I4 520 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 NRCAMQ92823 1304 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 PLXNA3P51805 1871 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 MAGEA3P43357 314 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 HADHQ16836 314 aaKnown RBP12.54□□□□□ -0.4
NCL-201ENST00000322723 CCDC38Q502W7 563 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 SH2D5Q6ZV89 423 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 ZNF276Q8N554 614 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 CCDC197Q8NCU1 140 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 CFAP57Q96MR6 1250 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 ELAC2Q9BQ52 826 aaKnown RBP12.54□□□□□ -0.4
NCL-201ENST00000322723 ASNSD1Q9NWL6 643 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 AGAP1Q9UPQ3 857 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 TYROBPO43914 113 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 GSTA1P08263 222 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 DARSP14868 501 aaKnown RBP12.53□□□□□ -0.4
NCL-201ENST00000322723 RPL22P35268 128 aaKnown RBP12.53□□□□□ -0.4
NCL-201ENST00000322723 FASTKD3Q14CZ7 662 aaKnown RBP12.53□□□□□ -0.4
NCL-201ENST00000322723 TAF5Q15542 800 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 ZRSR2Q15696 482 aaKnown RBP12.53□□□□□ -0.4
NCL-201ENST00000322723 ZFYVE27Q5T4F4 411 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 LRRC34Q8IZ02 419 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 PQLC3Q8N755 202 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 TBCBQ99426 244 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 MRPL45Q9BRJ2 306 aaKnown RBP12.53□□□□□ -0.4
NCL-201ENST00000322723 NT5C1AQ9BXI3 368 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 TSPAN16Q9UKR8 245 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 M0QYV0 167 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 RASSF9O75901 435 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 DNAJC8O75937 253 aaPredicted RBP12.53□□□□□ -0.4
NCL-201ENST00000322723 ASMTLO95671 621 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 ADCY1Q08828 1119 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 LLGL1Q15334 1064 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 RASIP1Q5U651 963 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 PLEKHH3Q7Z736 793 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 ANKRD42Q8N9B4 389 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 ZNF668Q96K58 619 aaPredicted RBP12.53□□□□□ -0.4
NCL-201ENST00000322723 PRMT1Q99873 361 aaKnown RBP12.53□□□□□ -0.4
NCL-201ENST00000322723 TMEM121Q9BTD3 319 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 INTS9Q9NV88 658 aaKnown RBP12.53□□□□□ -0.4
NCL-201ENST00000322723 AKT3Q9Y243 479 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 CCL15-CCL14A0A0B4J2E2 113 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 TMEM120BA0PK00 339 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 PPEF2O14830 753 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 MKRN3Q13064 507 aaKnown RBP12.53□□□□□ -0.4
NCL-201ENST00000322723 PDK2Q15119 407 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 CCL15Q16663 113 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 ANKRD22Q5VYY1 191 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 C9orf57Q5W0N0 161 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 C7orf31Q8N865 590 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 STAMBPL1Q96FJ0 436 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 ADAM33Q9BZ11 813 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 PLAC1Q9HBJ0 212 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 NOP53Q9NZM5 478 aaKnown RBP12.53□□□□□ -0.4
NCL-201ENST00000322723 SNX3O60493 162 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 MSS51Q4VC12 460 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 LRRC23Q53EV4 343 aaPredicted RBP12.53□□□□□ -0.4
NCL-201ENST00000322723 RAB6CQ53S08 254 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 FAM47CQ5HY64 1035 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 THEMIS2Q5TEJ8 643 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 OLFML2BQ68BL8 750 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 AGGF1Q8N302 714 aaeCLIP12.53□□□□□ -0.43e-9■■□□□ 11.5
NCL-201ENST00000322723 MAGEB18Q96M61 343 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 RAB6CQ9H0N0 254 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 CDHR5Q9HBB8 845 aa12.53□□□□□ -0.4
NCL-201ENST00000322723 BCLAF3A2AJT9 711 aaKnown RBP12.52□□□□□ -0.4
NCL-201ENST00000322723 DNM1LO00429 736 aa12.52□□□□□ -0.4
NCL-201ENST00000322723 TMEM63AO94886 807 aa12.52□□□□□ -0.4
NCL-201ENST00000322723 SMIM10L2AP0DMW4 78 aa12.52□□□□□ -0.4
NCL-201ENST00000322723 SMIM10L2BP0DMW5 78 aa12.52□□□□□ -0.4
NCL-201ENST00000322723 TGM2P21980 687 aa12.52□□□□□ -0.4
NCL-201ENST00000322723 GPS1Q13098 491 aa12.52□□□□□ -0.4
NCL-201ENST00000322723 SOWAHAQ2M3V2 549 aa12.52□□□□□ -0.4
NCL-201ENST00000322723 FNBP1LQ5T0N5 605 aa12.52□□□□□ -0.4
NCL-201ENST00000322723 PPP1R26Q5T8A7 1209 aaPredicted RBP12.52□□□□□ -0.4
NCL-201ENST00000322723 ADGRD1Q6QNK2 874 aa12.52□□□□□ -0.4
NCL-201ENST00000322723 EMC1Q8N766 993 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms