RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 AGO3Q9H9G7 860 aaKnown RBP17.78■□□□□ 0.44
SSR4-201ENST00000320857 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.78■□□□□ 0.44
SSR4-201ENST00000320857 PADI3Q9ULW8 664 aa17.78■□□□□ 0.44
SSR4-201ENST00000320857 NOD1Q9Y239 953 aa17.78■□□□□ 0.44
SSR4-201ENST00000320857 ARL5CA6NH57 179 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 MEIS3P2A8K0S8 358 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 DNALI1O14645 258 aaPredicted RBP17.77■□□□□ 0.44
SSR4-201ENST00000320857 GABRDO14764 452 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 GABBR2O75899 941 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 ENDOD1O94919 500 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 INHAP05111 366 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 CD48P09326 243 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 PTPN1P18031 435 aaKnown RBP17.77■□□□□ 0.44
SSR4-201ENST00000320857 CD52P31358 61 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 GRK4P32298 578 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 ACTN2P35609 894 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 LHX1P48742 406 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 ARSEP51690 589 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 ATP11AP98196 1134 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 OTUD4Q01804 1114 aaKnown RBP17.77■□□□□ 0.44
SSR4-201ENST00000320857 KRT81Q14533 505 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 TAF5Q15542 800 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 TRIM71Q2Q1W2 868 aaKnown RBP17.77■□□□□ 0.44
SSR4-201ENST00000320857 P3H1Q32P28 736 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 FAM26DQ5JW98 314 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 SH3PXD2AQ5TCZ1 1133 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 HIBCHQ6NVY1 386 aaPredicted RBP17.77■□□□□ 0.44
SSR4-201ENST00000320857 FAM172AQ8WUF8 416 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 LPPQ93052 612 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 SENP8Q96LD8 212 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 DUSP16Q9BY84 665 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 PCDH9Q9HC56 1237 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 NGRNQ9NPE2 291 aaKnown RBP17.77■□□□□ 0.44
SSR4-201ENST00000320857 AAASQ9NRG9 546 aa17.77■□□□□ 0.44
SSR4-201ENST00000320857 BCCIPQ9P287 314 aaKnown RBP eCLIP17.77■□□□□ 0.44
SSR4-201ENST00000320857 APOC4-APOC2K7ER74 178 aa17.77■□□□□ 0.43
SSR4-201ENST00000320857 SGK1O00141 431 aa17.77■□□□□ 0.43
SSR4-201ENST00000320857 APOC2P02655 101 aa17.77■□□□□ 0.43
SSR4-201ENST00000320857 GHRP10912 638 aa17.77■□□□□ 0.43
SSR4-201ENST00000320857 SKIP12755 728 aa17.77■□□□□ 0.43
SSR4-201ENST00000320857 LCP1P13796 627 aa17.77■□□□□ 0.43
SSR4-201ENST00000320857 RDXP35241 583 aaKnown RBP17.77■□□□□ 0.43
SSR4-201ENST00000320857 CHKAP35790 457 aa17.77■□□□□ 0.43
SSR4-201ENST00000320857 DSC3Q14574 896 aa17.77■□□□□ 0.43
SSR4-201ENST00000320857 DNAJC21Q5F1R6 531 aaKnown RBP17.77■□□□□ 0.43
SSR4-201ENST00000320857 EFHC1Q5JVL4 640 aa17.77■□□□□ 0.43
SSR4-201ENST00000320857 LHX8Q68G74 356 aa17.77■□□□□ 0.43
SSR4-201ENST00000320857 SCYL2Q6P3W7 929 aa17.77■□□□□ 0.43
SSR4-201ENST00000320857 AGMOQ6ZNB7 445 aa17.77■□□□□ 0.43
SSR4-201ENST00000320857 CYP4V2Q6ZWL3 525 aaPredicted RBP17.77■□□□□ 0.43
SSR4-201ENST00000320857 VSIG1Q86XK7 387 aa17.77■□□□□ 0.43
SSR4-201ENST00000320857 PGBD4Q96DM1 585 aa17.77■□□□□ 0.43
SSR4-201ENST00000320857 GLT1D1Q96MS3 346 aa17.77■□□□□ 0.43
SSR4-201ENST00000320857 B3GNT5Q9BYG0 378 aa17.77■□□□□ 0.43
SSR4-201ENST00000320857 CDC42EP4Q9H3Q1 356 aaKnown RBP17.77■□□□□ 0.43
SSR4-201ENST00000320857 TRMT13Q9NUP7 481 aaKnown RBP17.77■□□□□ 0.43
SSR4-201ENST00000320857 TPX2Q9ULW0 747 aaKnown RBP17.77■□□□□ 0.43
SSR4-201ENST00000320857 SQORQ9Y6N5 450 aa17.77■□□□□ 0.43
SSR4-201ENST00000320857 ERICH4A6NGS2 130 aa17.76■□□□□ 0.43
SSR4-201ENST00000320857 CAND2O75155 1236 aa17.76■□□□□ 0.43
SSR4-201ENST00000320857 SHBGP04278 402 aa17.76■□□□□ 0.43
SSR4-201ENST00000320857 SCNN1GP51170 649 aa17.76■□□□□ 0.43
SSR4-201ENST00000320857 C6orf118Q5T5N4 469 aa17.76■□□□□ 0.43
SSR4-201ENST00000320857 DSTYKQ6XUX3 929 aa17.76■□□□□ 0.43
SSR4-201ENST00000320857 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.76■□□□□ 0.43
SSR4-201ENST00000320857 HMX1Q9NP08 348 aaPredicted RBP17.76■□□□□ 0.43
SSR4-201ENST00000320857 UBN1Q9NPG3 1134 aa17.76■□□□□ 0.43
SSR4-201ENST00000320857 MIOSQ9NXC5 875 aa17.76■□□□□ 0.43
SSR4-201ENST00000320857 MCF2LO15068 1137 aa17.75■□□□□ 0.43
SSR4-201ENST00000320857 MDM4O15151 490 aa17.75■□□□□ 0.43
SSR4-201ENST00000320857 NPR3P17342 541 aa17.75■□□□□ 0.43
SSR4-201ENST00000320857 PAX3P23760 479 aa17.75■□□□□ 0.43
SSR4-201ENST00000320857 TKTP29401 623 aaKnown RBP17.75■□□□□ 0.43
SSR4-201ENST00000320857 CLCNKBP51801 687 aa17.75■□□□□ 0.43
SSR4-201ENST00000320857 GNGT1P63211 74 aa17.75■□□□□ 0.43
SSR4-201ENST00000320857 GPS1Q13098 491 aa17.75■□□□□ 0.43
SSR4-201ENST00000320857 DPYSL3Q14195 570 aa17.75■□□□□ 0.43
SSR4-201ENST00000320857 LPIN1Q14693 890 aa17.75■□□□□ 0.43
SSR4-201ENST00000320857 FBXO46Q6PJ61 603 aaPredicted RBP17.75■□□□□ 0.43
SSR4-201ENST00000320857 PCGF5Q86SE9 256 aa17.75■□□□□ 0.43
SSR4-201ENST00000320857 RELL1Q8IUW5 271 aa17.75■□□□□ 0.43
SSR4-201ENST00000320857 FUKQ8N0W3 1084 aa17.75■□□□□ 0.43
SSR4-201ENST00000320857 ZCCHC9Q8N567 271 aaKnown RBP17.75■□□□□ 0.43
SSR4-201ENST00000320857 RSAD2Q8WXG1 361 aa17.75■□□□□ 0.43
SSR4-201ENST00000320857 PGM2Q96G03 612 aa17.75■□□□□ 0.43
SSR4-201ENST00000320857 TMEM121Q9BTD3 319 aa17.75■□□□□ 0.43
SSR4-201ENST00000320857 MED10Q9BTT4 135 aa17.75■□□□□ 0.43
SSR4-201ENST00000320857 ROPN1BQ9BZX4 212 aaPredicted RBP17.75■□□□□ 0.43
SSR4-201ENST00000320857 ROPN1Q9HAT0 212 aaPredicted RBP17.75■□□□□ 0.43
SSR4-201ENST00000320857 DDX43Q9NXZ2 648 aaKnown RBP17.75■□□□□ 0.43
SSR4-201ENST00000320857 NOVA2Q9UNW9 492 aaKnown RBP17.75■□□□□ 0.43
SSR4-201ENST00000320857 A0A0U1RQF3 1178 aa17.74■□□□□ 0.43
SSR4-201ENST00000320857 ATP2C2O75185 946 aa17.74■□□□□ 0.43
SSR4-201ENST00000320857 ACAT1P24752 427 aaKnown RBP17.74■□□□□ 0.43
SSR4-201ENST00000320857 ATP1A2P50993 1020 aa17.74■□□□□ 0.43
SSR4-201ENST00000320857 EIF3EP60228 445 aaKnown RBP17.74■□□□□ 0.43
SSR4-201ENST00000320857 MORF4L2Q15014 288 aa17.74■□□□□ 0.43
SSR4-201ENST00000320857 PRUNE1Q86TP1 453 aa17.74■□□□□ 0.43
SSR4-201ENST00000320857 PIGZQ86VD9 579 aa17.74■□□□□ 0.43
SSR4-201ENST00000320857 KCTD13Q8WZ19 329 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms